G274918


Basic Information

Item Value
gene id G274918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55460546 ~ 55466157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312115
ggtcgcaaagttcaagggggccgaatgctttcgcaaggcactgtagatactgtaggcaAATAGACATAATTAAACTATTTTATTGGTCTGTTGATATATTTTTGGTGTCGTAGTTTTAACAACAACAATCAATAATCAGACCATTACTGAGAATTACAGCTAAGATtttacatatacactgagtgtacaaaaagaacaccttcctaatattgagttgcaccctttcAGCCCTCAgcacagcctcaatttgtcaggacaTGGACTACAagttgtcgaaagcattccacagggatgctggcccatgttgactccaatgcttcccacagtggctggtggaccagttttgatacacatgggaaagtGTTGAGcaggaaaaacccagcagtgttgcagttctactaccaccctgttcaaaggcacttcaatcgtttgtcttgccaattcactctctgaatggcacacatacacaatccatgtctccattGTCTCAAGGCGCTatactaattgaagtggatttaacatgtaagggatcatagctttcagttggattcacctggtcagtctatgtcatggaaagagcaggtgttcataatgttttgtacactcagtgtatattgtccCTATTAAATCTCTTAAGAAAAGGGTCTTAACTGGCCTGGGCAGTAAAGCATTTGCCATAGTATGCAGAATGTCATTACCAGctagtagttgtagttgtagcctAGCCGTGTATGCCAAGTATCAGGGGAGGTCTGTctcatcagtcacagtggtcccCTGTCCACATCAATACAGTCCTCCCAAAAACATCCAGGCTGTTCAAAGCCATGTAGACTAAACCAGAcatcacaaatcaaatcaaatttgattggtcacatacacatttttccGATGCTATCACAGGTGCAGCTAAATGCTTATgcgtctagctccaacagtgcagtaatacctaaaaatacaaaacaatacacacaaatccacaAAATTAAAAAgtcagttcttaactgacttgcctggttaaataaaaaataataaaaaaacaaaaaatgacagtatatgatggtgtgtatagacagtatggacagtatagacagtatatgatggtttgtatagacagtatggacagtatatgatggtgtgtatagacagtataaacagtatatgatggtgtgtatagacagtatagacagtatatgatggtgtgtatagacagtatggacagtatatggtggtgtgtatagacagtatggacagtatatagtggtgtgtatagacagtatggacagtatatgatggtgtgtatagacagtatatgatggtgtgtatagacagtatatgatggtgagtatagacagttaTGATGATGTgcatagacagtatggacagtatatgatggtttgtatagacagtatggacagtatatgatggtgtgtatagacagtatatgatggtgtgtatagacagtatggacagtatatgatggtgtgtatagacagtatgatCAGTATATGACGGTTTGTTTAGACAGTATGGACAATATAGAatggtttgtatagacagtatggacagtatatgatggtgtgtgtagacagtatatgatggtttgtatagacagtatcgacagtatatgatggtgtgtatagacagtatgggcCGTATATgatggtttgtatagacagtaAGGAcaatatatgatggtgtgtatagacagtatggacagtatatgatggtgtgtatagacagtatagacagcatATGATGGTTTGTATAGACAATATCgacagtatatgatggtgtgtatagacagtatggacagtatatgatggtgtgtatagacagtatatgatggtgtgtatagacagtatggacagtatatgatggtgtgtatagacactatggacagtatatgaatagaaaaggtgtgtacagcagtagttatataggctgaacattgactagaatacagtatatatatataaagtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312115 True 1984 lncRNA 0.38 5 55460546 55466157

Neighbor

gene id symbol gene type direction distance location
LOC110520234 LOC106586346 coding upstream 48991 55405871 ~ 55411555 (+)
lcmt2 NA coding upstream 71824 55380671 ~ 55388722 (+)
LOC110520231 dbr1 coding upstream 85688 55371759 ~ 55375526 (+)
kcnh3 LOC103481844 coding upstream 104896 55157443 ~ 55355650 (+)
LOC110520225 LOC106586338 coding upstream 415503 55021730 ~ 55045043 (+)
rftn2 rftn2 coding downstream 275540 55741697 ~ 55779314 (+)
LOC110520236 LOC106586369 coding downstream 326202 55792359 ~ 55800630 (+)
LOC110520240 LOC106586372 coding downstream 367586 55833743 ~ 55849324 (+)
LOC118964367 NA coding downstream 376048 55842205 ~ 55842343 (+)
LOC118964369 NA coding downstream 377597 55843754 ~ 55843823 (+)
G274917 NA non-coding upstream 5903 55452850 ~ 55454643 (+)
G274916 NA non-coding upstream 12552 55446907 ~ 55447994 (+)
G274914 NA non-coding upstream 16304 55443589 ~ 55444242 (+)
G274913 NA non-coding upstream 19597 55439742 ~ 55440949 (+)
G274895 NA non-coding upstream 46162 55414101 ~ 55414384 (+)
G274919 NA non-coding downstream 483 55466640 ~ 55466950 (+)
G274920 NA non-coding downstream 1802 55467959 ~ 55468544 (+)
G274921 NA non-coding downstream 3388 55469545 ~ 55469761 (+)
G274922 NA non-coding downstream 5594 55471751 ~ 55472059 (+)
G274923 NA non-coding downstream 6090 55472247 ~ 55472764 (+)
G274592 NA other upstream 585431 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1618929 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1801863 53657461 ~ 53658683 (+)
G272965 NA other upstream 1808115 53648825 ~ 53652431 (+)
G275542 LOC106586374 other downstream 434037 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 449172 55915329 ~ 55916133 (+)
G277296 NA other downstream 1798410 57264567 ~ 57264892 (+)
G277973 NA other downstream 2323577 57789734 ~ 57790332 (+)
G280315 NA other downstream 4586559 60052716 ~ 60054417 (+)

Expression


Co-expression Network