G275296


Basic Information

Item Value
gene id G275296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55482360 ~ 55483380 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312547
gtttgttgaaggagtctgtgtgtgtgtgtgtgtgtgtgtgtgtggggggggggggggggggggggggtatcataTGTCTGAATCAGTTCTTCCCCAGGTTGGTATTTGGCTTATCTGTCTGGTATTGTTTATCTACTACTGTGGAGACACACTGACTGTCTGATATAACAGCCTGGGGAAGAGGGTTATCAACCCTGCTCCATCCGCCACCCACATCACGAGGACAGGAGAAACTGCCCCTAAGCACTGACAGGGGCCACATATGTTTGCATTCCCTTAAcgattaaggttaggattgggagtTGGGTACAATAGGTTAGGATTGGGAGTTGGGCACAATAGGTTAGGATTGGGAGTTGGGTACAATAGGTTAGGATTGGGAGTTGGGCACAATAGGTTAGGATTGGGAGTTGGGTACAATAGGTTAGGATTGGGAGTTGGGCACAATAGATTAGGATTGGGAGTTGGGCACAATAGGTTAGGATTGGGAGTTGGGTACAATAGGTTGGGATTGGGAGTTGGGTACAATAGGTTAGGATTGGGAGTTGGGTACAATAGATTAGGATTGGGAGTTGGGCACAATAGGTTAGGAAAGCTGTAGCAGGATAGGGACAATGTCATGGGTCATGGGTGAAACAGGCCTCTCACCTGGCTCTTGTTGGCAGCCACCTTGGCGAACAGCGCCTGAGACACCTTCGCTCTCTTCATCTCCTGCTGGATCTCATCATAGATACCTGACGTGATGTTGACCAGAGACTCCAGCTTCAGGGGCAGGTCTGGGTTGAGGCATGGCGGCTTGGGCTGAGGGAGGATAGGTAGGAGGGACCAGGGAGAGGCGGCCCATAGAGAAAGAACCAGTTTTTAAACCAGGAAGTTGTACCAGAGTTTGCCTGAATGGGTAACACTGCCAACTCTAGTTCACATGTTGTCCCTGTGCCAACGACCAAAGTTTAGGTTTCAAGTAAGAATGACAGGTAATCAGTTGACGATCAGTCAAAGTTTTTTCTTCTTTTAAACAAAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312547 True 1021 lncRNA 0.49 1 55482360 55483380

Neighbor

gene id symbol gene type direction distance location
LOC110520233 NA coding downstream 87357 55392189 ~ 55395003 (-)
crygs2 LOC106586348 coding downstream 91028 55389101 ~ 55391332 (-)
LOC110520232 LOC106586350 coding downstream 100199 55375915 ~ 55382161 (-)
armc8 armc8 coding downstream 110693 55357367 ~ 55371667 (-)
idh1 LOC106586335 coding downstream 335972 55131394 ~ 55146388 (-)
LOC110504309 plcl1 coding upstream 108984 55592364 ~ 55715785 (-)
LOC110520238 LOC106586370 coding upstream 296123 55779503 ~ 55821242 (-)
LOC110520241 LOC106586374 coding upstream 407002 55890382 ~ 55923883 (-)
LOC110520251 LOC106586357 coding upstream 500493 55983873 ~ 55985477 (-)
LOC110520250 LOC106586358 coding upstream 503723 55987103 ~ 55988048 (-)
G275295 NA non-coding downstream 1093 55480995 ~ 55481267 (-)
G275294 satb2 non-coding downstream 1773 55479941 ~ 55480587 (-)
G275292 NA non-coding downstream 4312 55477757 ~ 55478048 (-)
G275291 NA non-coding downstream 4770 55476347 ~ 55477590 (-)
G275290 NA non-coding downstream 6328 55475815 ~ 55476032 (-)
G275297 NA non-coding upstream 174 55483554 ~ 55484217 (-)
G275328 NA non-coding upstream 62722 55546102 ~ 55546396 (-)
G275336 NA non-coding upstream 73733 55557113 ~ 55557340 (-)
G275349 NA non-coding upstream 82662 55566042 ~ 55566241 (-)
G275361 NA non-coding upstream 94306 55577686 ~ 55577901 (-)
G275250 NA other downstream 70873 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 363148 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 799555 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 2231276 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 2773544 52693956 ~ 52708816 (-)
si:dkey-91i10.3 LOC106586420 other upstream 1787402 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 1919604 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2101006 57584386 ~ 57589183 (-)
G284018 NA other upstream 7231195 62714575 ~ 62715177 (-)
G286522 NA other upstream 9486169 64969549 ~ 64970755 (-)

Expression


Co-expression Network