G275297


Basic Information

Item Value
gene id G275297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55483554 ~ 55484217 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312548
CAATGATATTACAAACATATCAGACATAAGGAGCCATGTTACCCTCGAGCATACGGAGCCCATGTCCATGCGCGCGGACCATACCACTAAGGTTAGGACTCAGGTTAGGGAAATCTGATGCTACATCAGCTGGTCTCTCTCACCTGTGGTTCTTGGGGCAGGTGTAGTACAGTATGCAGCCTCTCACTGTGGTGGTGCCTGGACTCCTCTTCATACAccaggtctctgtctgtctggagcaGGGTCAGGAACCTCCGGATGGTACACAGATTCTCCCACAGAGTACGGTTCTCTGGGCTAGGGTTCTCCTTCCACCGCAGCAACTCACACAGCCAGCCCTAAGAGGGGTAGATGGGAGCAGAgacaggagaagggagggaggaagggaggggagaaagggatgGGGAGTGGGGGGGGAGATTTGATTATCTATGCTAGACTAGGCCAGTCTTTGACACCAGCTGTTGTGTGCATCCAGCCTCCACCAGCATGCAGTGTTAATAACCTGATCAGTtctcatcctccctctcatcccccatccccctctcactcagcatccccctctcatcccccatcctcctctccctcagcatccctctctcctctcctctctgggccagctgcagcagATGGGTGCAGTGAGCCATGACCCCCAGCCCAACTC

Function

NR:

description
PREDICTED: DNA-binding protein SATB2-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312548 True 664 lncRNA 0.55 1 55483554 55484217

Neighbor

gene id symbol gene type direction distance location
LOC110520233 NA coding downstream 88551 55392189 ~ 55395003 (-)
crygs2 LOC106586348 coding downstream 92222 55389101 ~ 55391332 (-)
LOC110520232 LOC106586350 coding downstream 101393 55375915 ~ 55382161 (-)
armc8 armc8 coding downstream 111887 55357367 ~ 55371667 (-)
idh1 LOC106586335 coding downstream 337166 55131394 ~ 55146388 (-)
LOC110504309 plcl1 coding upstream 108147 55592364 ~ 55715785 (-)
LOC110520238 LOC106586370 coding upstream 295286 55779503 ~ 55821242 (-)
LOC110520241 LOC106586374 coding upstream 406165 55890382 ~ 55923883 (-)
LOC110520251 LOC106586357 coding upstream 499656 55983873 ~ 55985477 (-)
LOC110520250 LOC106586358 coding upstream 502886 55987103 ~ 55988048 (-)
G275296 NA non-coding downstream 174 55482360 ~ 55483380 (-)
G275295 NA non-coding downstream 2287 55480995 ~ 55481267 (-)
G275294 satb2 non-coding downstream 2967 55479941 ~ 55480587 (-)
G275292 NA non-coding downstream 5506 55477757 ~ 55478048 (-)
G275291 NA non-coding downstream 5964 55476347 ~ 55477590 (-)
G275328 NA non-coding upstream 61885 55546102 ~ 55546396 (-)
G275336 NA non-coding upstream 72896 55557113 ~ 55557340 (-)
G275349 NA non-coding upstream 81825 55566042 ~ 55566241 (-)
G275361 NA non-coding upstream 93469 55577686 ~ 55577901 (-)
G275363 NA non-coding upstream 93940 55578157 ~ 55578488 (-)
G275250 NA other downstream 72067 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 364342 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 800749 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 2232470 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 2774738 52693956 ~ 52708816 (-)
si:dkey-91i10.3 LOC106586420 other upstream 1786565 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 1918767 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2100169 57584386 ~ 57589183 (-)
G284018 NA other upstream 7230358 62714575 ~ 62715177 (-)
G286522 NA other upstream 9485332 64969549 ~ 64970755 (-)

Expression


Co-expression Network