Gene
RNA
| Item | Value |
|---|---|
| gene id | G275361 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55577686 ~ 55577901 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LINE-1 reverse transcriptase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312618 | True | 216 | lncRNA | 0.42 | 1 | 55577686 | 55577901 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520233 | NA | coding | downstream | 182683 | 55392189 ~ 55395003 (-) |
| crygs2 | LOC106586348 | coding | downstream | 186354 | 55389101 ~ 55391332 (-) |
| LOC110520232 | LOC106586350 | coding | downstream | 195525 | 55375915 ~ 55382161 (-) |
| armc8 | armc8 | coding | downstream | 206019 | 55357367 ~ 55371667 (-) |
| idh1 | LOC106586335 | coding | downstream | 431298 | 55131394 ~ 55146388 (-) |
| LOC110504309 | plcl1 | coding | upstream | 14463 | 55592364 ~ 55715785 (-) |
| LOC110520238 | LOC106586370 | coding | upstream | 201602 | 55779503 ~ 55821242 (-) |
| LOC110520241 | LOC106586374 | coding | upstream | 312481 | 55890382 ~ 55923883 (-) |
| LOC110520251 | LOC106586357 | coding | upstream | 405972 | 55983873 ~ 55985477 (-) |
| LOC110520250 | LOC106586358 | coding | upstream | 409202 | 55987103 ~ 55988048 (-) |
| G275349 | NA | non-coding | downstream | 11445 | 55566042 ~ 55566241 (-) |
| G275336 | NA | non-coding | downstream | 20346 | 55557113 ~ 55557340 (-) |
| G275328 | NA | non-coding | downstream | 31290 | 55546102 ~ 55546396 (-) |
| G275297 | NA | non-coding | downstream | 93469 | 55483554 ~ 55484217 (-) |
| G275296 | NA | non-coding | downstream | 94306 | 55482360 ~ 55483380 (-) |
| G275363 | NA | non-coding | upstream | 256 | 55578157 ~ 55578488 (-) |
| G275366 | NA | non-coding | upstream | 3488 | 55581389 ~ 55581635 (-) |
| G275368 | NA | non-coding | upstream | 7225 | 55585126 ~ 55585354 (-) |
| G275376 | NA | non-coding | upstream | 13843 | 55591744 ~ 55592132 (-) |
| G276319 | NA | non-coding | upstream | 21986 | 55599887 ~ 55600189 (-) |
| G275250 | NA | other | downstream | 166199 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 458474 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 894881 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2326602 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2868870 | 52693956 ~ 52708816 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1692881 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 1825083 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2006485 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 7136674 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 9391648 | 64969549 ~ 64970755 (-) |
