G275468


Basic Information

Item Value
gene id G275468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55724949 ~ 55725248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312733
atacagtggggagaacaagtatttgatacactgccgattttgcaggttttcctactaacAAAGCATGTAAGTCTGTCATttatatcataggtacacttcaactgtgagagacggaatataaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacaaaagtatttgatacatcagaaaagcagaacttaatatttgttacagaaacctttgtttgcaattacaaagatcatacatttcctgtagttcttgaccaggtttgcacacactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312733 True 300 lncRNA 0.32 1 55724949 55725248

Neighbor

gene id symbol gene type direction distance location
LOC110504295 LOC106586344 coding upstream 228361 55430193 ~ 55496588 (+)
LOC110520234 LOC106586346 coding upstream 313394 55405871 ~ 55411555 (+)
lcmt2 NA coding upstream 336227 55380671 ~ 55388722 (+)
LOC110520231 dbr1 coding upstream 350091 55371759 ~ 55375526 (+)
kcnh3 LOC103481844 coding upstream 369299 55157443 ~ 55355650 (+)
rftn2 rftn2 coding downstream 16449 55741697 ~ 55779314 (+)
LOC110520236 LOC106586369 coding downstream 67111 55792359 ~ 55800630 (+)
LOC110520240 LOC106586372 coding downstream 108495 55833743 ~ 55849324 (+)
LOC118964367 NA coding downstream 116957 55842205 ~ 55842343 (+)
LOC118964369 NA coding downstream 118506 55843754 ~ 55843823 (+)
G275461 NA non-coding upstream 9611 55714683 ~ 55715338 (+)
G275460 NA non-coding upstream 11704 55712845 ~ 55713245 (+)
G275450 NA non-coding upstream 17798 55706907 ~ 55707151 (+)
G275429 NA non-coding upstream 46549 55678115 ~ 55678400 (+)
G275377 NA non-coding upstream 131627 55592405 ~ 55593322 (+)
G275479 NA non-coding downstream 10408 55735656 ~ 55735862 (+)
G275480 NA non-coding downstream 12366 55737614 ~ 55737913 (+)
G275484 NA non-coding downstream 18737 55743985 ~ 55744259 (+)
G275498 NA non-coding downstream 40764 55766012 ~ 55767976 (+)
G275500 NA non-coding downstream 42811 55768059 ~ 55768413 (+)
G274592 NA other upstream 849834 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1883332 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 2066266 53657461 ~ 53658683 (+)
G272965 NA other upstream 2072518 53648825 ~ 53652431 (+)
G275542 LOC106586374 other downstream 174946 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 190081 55915329 ~ 55916133 (+)
G277296 NA other downstream 1539319 57264567 ~ 57264892 (+)
G277973 NA other downstream 2064486 57789734 ~ 57790332 (+)
G280315 NA other downstream 4327468 60052716 ~ 60054417 (+)

Expression


Co-expression Network