Gene
RNA
| Item | Value |
|---|---|
| gene id | G276445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55738370 ~ 55738588 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ligand-dependent nuclear receptor-interacting factor 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313843 | True | 219 | lncRNA | 0.51 | 1 | 55738370 | 55738588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504309 | plcl1 | coding | downstream | 22585 | 55592364 ~ 55715785 (-) |
| LOC110520233 | NA | coding | downstream | 343367 | 55392189 ~ 55395003 (-) |
| crygs2 | LOC106586348 | coding | downstream | 347038 | 55389101 ~ 55391332 (-) |
| LOC110520232 | LOC106586350 | coding | downstream | 356209 | 55375915 ~ 55382161 (-) |
| armc8 | armc8 | coding | downstream | 366703 | 55357367 ~ 55371667 (-) |
| LOC110520238 | LOC106586370 | coding | upstream | 40915 | 55779503 ~ 55821242 (-) |
| LOC110520241 | LOC106586374 | coding | upstream | 151794 | 55890382 ~ 55923883 (-) |
| LOC110520251 | LOC106586357 | coding | upstream | 245285 | 55983873 ~ 55985477 (-) |
| LOC110520250 | LOC106586358 | coding | upstream | 248515 | 55987103 ~ 55988048 (-) |
| LOC110505323 | LOC106586359 | coding | upstream | 259178 | 55997766 ~ 55999561 (-) |
| G276443 | NA | non-coding | downstream | 4536 | 55733500 ~ 55733834 (-) |
| G276401 | NA | non-coding | downstream | 15960 | 55722191 ~ 55722410 (-) |
| G276400 | NA | non-coding | downstream | 16504 | 55721593 ~ 55721866 (-) |
| G276397 | NA | non-coding | downstream | 20250 | 55717816 ~ 55718120 (-) |
| G276396 | NA | non-coding | downstream | 24654 | 55713517 ~ 55713716 (-) |
| G276446 | NA | non-coding | upstream | 834 | 55739422 ~ 55739756 (-) |
| G276458 | NA | non-coding | upstream | 27721 | 55766309 ~ 55768336 (-) |
| G276421 | NA | non-coding | upstream | 142419 | 55881007 ~ 55881558 (-) |
| G276434 | NA | non-coding | upstream | 195248 | 55933836 ~ 55934130 (-) |
| G275250 | NA | other | downstream | 326883 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 619158 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 1055565 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2487286 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 3029554 | 52693956 ~ 52708816 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1532194 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 1664396 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 1845798 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 6975987 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 9230961 | 64969549 ~ 64970755 (-) |
