G275536


Basic Information

Item Value
gene id G275536
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55870698 ~ 55903415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312814
ccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcatgCACAGTGccccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgaagctctctgcgctttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312814 True 347 lncRNA 0.46 2 55870698 55903415

Neighbor

gene id symbol gene type direction distance location
LOC110520240 LOC106586372 coding upstream 21374 55833743 ~ 55849324 (+)
LOC118964369 NA coding upstream 26875 55843754 ~ 55843823 (+)
LOC118964367 NA coding upstream 28355 55842205 ~ 55842343 (+)
LOC110520236 LOC106586369 coding upstream 70068 55792359 ~ 55800630 (+)
rftn2 rftn2 coding upstream 91384 55741697 ~ 55779314 (+)
LOC118962850 NA coding downstream 30148 55933563 ~ 55935062 (+)
si:dkey-57a22.11 LOC106586378 coding downstream 38892 55942307 ~ 55948120 (+)
LOC110520246 LOC106586379 coding downstream 45178 55948593 ~ 55953872 (+)
LOC110504321 LOC106586380 coding downstream 53916 55957331 ~ 55961495 (+)
LOC110505308 LOC106586381 coding downstream 59380 55962795 ~ 55964012 (+)
G275495 NA non-coding upstream 79277 55788403 ~ 55791421 (+)
G275500 NA non-coding upstream 102285 55768059 ~ 55768413 (+)
G275498 NA non-coding upstream 102722 55766012 ~ 55767976 (+)
G275484 NA non-coding upstream 126439 55743985 ~ 55744259 (+)
G275480 NA non-coding upstream 132785 55737614 ~ 55737913 (+)
G275545 NA non-coding downstream 1407 55904822 ~ 55905288 (+)
G275548 LOC106586374 non-coding downstream 6068 55909483 ~ 55910082 (+)
G275549 NA non-coding downstream 6757 55910172 ~ 55910394 (+)
G275550 NA non-coding downstream 8398 55911813 ~ 55912242 (+)
G275551 NA non-coding downstream 9001 55912416 ~ 55912647 (+)
LOC110520231 dbr1 other upstream 495172 55371759 ~ 55375526 (+)
G274592 NA other upstream 995583 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 2029081 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 2212015 53657461 ~ 53658683 (+)
G272965 NA other upstream 2218267 53648825 ~ 53652431 (+)
G275553 LOC107595854 other downstream 11914 55915329 ~ 55916133 (+)
G277296 NA other downstream 1361152 57264567 ~ 57264892 (+)
G277973 NA other downstream 1886319 57789734 ~ 57790332 (+)
G280315 NA other downstream 4149301 60052716 ~ 60054417 (+)
G281141 NA other downstream 4383973 60287388 ~ 60303967 (+)

Expression


Co-expression Network