Gene
RNA
| Item | Value |
|---|---|
| gene id | G275548 |
| gene name | LOC106586374 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55909483 ~ 55910082 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 1-phosphatidylinositol 3-phosphate 5-kinase-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312828 | True | 330 | lncRNA | 0.52 | 2 | 55909483 | 55910082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd44 | LOC106586375 | coding | upstream | 19385 | 55856319 ~ 55890098 (+) |
| LOC110520240 | LOC106586372 | coding | upstream | 60159 | 55833743 ~ 55849324 (+) |
| LOC118964369 | NA | coding | upstream | 65660 | 55843754 ~ 55843823 (+) |
| LOC118964367 | NA | coding | upstream | 67140 | 55842205 ~ 55842343 (+) |
| LOC110520236 | LOC106586369 | coding | upstream | 108853 | 55792359 ~ 55800630 (+) |
| LOC118962850 | NA | coding | downstream | 23481 | 55933563 ~ 55935062 (+) |
| si:dkey-57a22.11 | LOC106586378 | coding | downstream | 32225 | 55942307 ~ 55948120 (+) |
| LOC110520246 | LOC106586379 | coding | downstream | 38511 | 55948593 ~ 55953872 (+) |
| LOC110504321 | LOC106586380 | coding | downstream | 47249 | 55957331 ~ 55961495 (+) |
| LOC110505308 | LOC106586381 | coding | downstream | 52713 | 55962795 ~ 55964012 (+) |
| G275545 | NA | non-coding | upstream | 4195 | 55904822 ~ 55905288 (+) |
| G275544 | LOC106586374 | non-coding | upstream | 4993 | 55900977 ~ 55904490 (+) |
| G275536 | NA | non-coding | upstream | 6068 | 55870698 ~ 55903415 (+) |
| G275495 | NA | non-coding | upstream | 118062 | 55788403 ~ 55791421 (+) |
| G275500 | NA | non-coding | upstream | 141070 | 55768059 ~ 55768413 (+) |
| G275549 | NA | non-coding | downstream | 90 | 55910172 ~ 55910394 (+) |
| G275550 | NA | non-coding | downstream | 1731 | 55911813 ~ 55912242 (+) |
| G275551 | NA | non-coding | downstream | 2334 | 55912416 ~ 55912647 (+) |
| G275552 | NA | non-coding | downstream | 2608 | 55912690 ~ 55913022 (+) |
| G275554 | NA | non-coding | downstream | 4210 | 55914292 ~ 55914892 (+) |
| G275542 | LOC106586374 | other | upstream | 8740 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 533957 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1034368 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2067866 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 2250800 | 53657461 ~ 53658683 (+) |
| G275553 | LOC107595854 | other | downstream | 5247 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 1354485 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1879652 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 4142634 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 4377306 | 60287388 ~ 60303967 (+) |
