G275550


Basic Information

Item Value
gene id G275550
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55911813 ~ 55912242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312830
CTCATGTAATCTCTGCTTAATACAACAGGATGCTTTCTCAGACATCCAGAATGGTTTTCACTCAGCATGATGTCTGTCTTTACCTTGTGGAGATAGTTCCATTCCTTAACAGCCAGTTGACCAACTCCTTCCCCACAATGCAGTTGGGGTATGTACGGAGCCAGTAGCGGTGGTCCTGGAACTCCATACCAGTAGTGTTGTGACAAATCTTCTTCCACAGGTCTTTGAGCTGGGATGAGTCCTACATGTCATCACAGTCAGTCAAAAATGACTTATGTTTGCTTTGTCAAGAATGGATTGTAAATTGGACAGAACAAATtatacagacagagatataggGAAAGATTGAGGATAGagggaagcaagagagagagaaagcgaaagagtaattgcgagatggagagagagggcgagcaaGCGAGCGAGAAAG

Function

NR:

description
1-phosphatidylinositol 3-phosphate 5-kinase isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312830 True 430 lncRNA 0.44 1 55911813 55912242

Neighbor

gene id symbol gene type direction distance location
ankrd44 LOC106586375 coding upstream 21715 55856319 ~ 55890098 (+)
LOC110520240 LOC106586372 coding upstream 62489 55833743 ~ 55849324 (+)
LOC118964369 NA coding upstream 67990 55843754 ~ 55843823 (+)
LOC118964367 NA coding upstream 69470 55842205 ~ 55842343 (+)
LOC110520236 LOC106586369 coding upstream 111183 55792359 ~ 55800630 (+)
LOC118962850 NA coding downstream 21321 55933563 ~ 55935062 (+)
si:dkey-57a22.11 LOC106586378 coding downstream 30065 55942307 ~ 55948120 (+)
LOC110520246 LOC106586379 coding downstream 36351 55948593 ~ 55953872 (+)
LOC110504321 LOC106586380 coding downstream 45089 55957331 ~ 55961495 (+)
LOC110505308 LOC106586381 coding downstream 50553 55962795 ~ 55964012 (+)
G275549 NA non-coding upstream 1419 55910172 ~ 55910394 (+)
G275548 LOC106586374 non-coding upstream 1731 55909483 ~ 55910082 (+)
G275545 NA non-coding upstream 6525 55904822 ~ 55905288 (+)
G275544 LOC106586374 non-coding upstream 7323 55900977 ~ 55904490 (+)
G275536 NA non-coding upstream 8398 55870698 ~ 55903415 (+)
G275551 NA non-coding downstream 174 55912416 ~ 55912647 (+)
G275552 NA non-coding downstream 448 55912690 ~ 55913022 (+)
G275554 NA non-coding downstream 2050 55914292 ~ 55914892 (+)
G275553 LOC107595854 non-coding downstream 3651 55915329 ~ 55916133 (+)
G275555 NA non-coding downstream 5073 55917315 ~ 55917548 (+)
G275542 LOC106586374 other upstream 11070 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 536287 55371759 ~ 55375526 (+)
G274592 NA other upstream 1036698 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 2070196 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 2253130 53657461 ~ 53658683 (+)
G277296 NA other downstream 1352325 57264567 ~ 57264892 (+)
G277973 NA other downstream 1877492 57789734 ~ 57790332 (+)
G280315 NA other downstream 4140474 60052716 ~ 60054417 (+)
G281141 NA other downstream 4375146 60287388 ~ 60303967 (+)

Expression


Co-expression Network