G275552


Basic Information

Item Value
gene id G275552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55912690 ~ 55913022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312832
gaaaaagggggtaaaaatgaACAGAGAGAATaaggggaaagagggagtgaaAGTAAGAGAGCATCATTACCAACAgtatcttcctctcctcttcgctGTGGTCAGGTTTTGGCATGGCCCTGCTGGTCTGGGGGCTCACTGAGCTGTCATAGGAGGGCACCATGGAGGAGCCAGACCGGTCCAGGGACAGGTTGGTCACACTGGCTGACCTAGATAAGACAGGGCTGGCATTACAGGGCCATCACTCAATAGATGCAGCAACACATTTTCATTCTGTACCTTACTTCTCATTCTATACTATATTTCtctaacttgtgtgtgtgtgtgtctgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312832 True 333 lncRNA 0.48 1 55912690 55913022

Neighbor

gene id symbol gene type direction distance location
ankrd44 LOC106586375 coding upstream 22592 55856319 ~ 55890098 (+)
LOC110520240 LOC106586372 coding upstream 63366 55833743 ~ 55849324 (+)
LOC118964369 NA coding upstream 68867 55843754 ~ 55843823 (+)
LOC118964367 NA coding upstream 70347 55842205 ~ 55842343 (+)
LOC110520236 LOC106586369 coding upstream 112060 55792359 ~ 55800630 (+)
LOC118962850 NA coding downstream 20541 55933563 ~ 55935062 (+)
si:dkey-57a22.11 LOC106586378 coding downstream 29285 55942307 ~ 55948120 (+)
LOC110520246 LOC106586379 coding downstream 35571 55948593 ~ 55953872 (+)
LOC110504321 LOC106586380 coding downstream 44309 55957331 ~ 55961495 (+)
LOC110505308 LOC106586381 coding downstream 49773 55962795 ~ 55964012 (+)
G275551 NA non-coding upstream 43 55912416 ~ 55912647 (+)
G275550 NA non-coding upstream 448 55911813 ~ 55912242 (+)
G275549 NA non-coding upstream 2296 55910172 ~ 55910394 (+)
G275548 LOC106586374 non-coding upstream 2608 55909483 ~ 55910082 (+)
G275545 NA non-coding upstream 7402 55904822 ~ 55905288 (+)
G275554 NA non-coding downstream 1270 55914292 ~ 55914892 (+)
G275553 LOC107595854 non-coding downstream 2871 55915329 ~ 55916133 (+)
G275555 NA non-coding downstream 4293 55917315 ~ 55917548 (+)
G275556 NA non-coding downstream 5039 55918061 ~ 55918584 (+)
G275559 NA non-coding downstream 6811 55919833 ~ 55920370 (+)
G275542 LOC106586374 other upstream 11947 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 537164 55371759 ~ 55375526 (+)
G274592 NA other upstream 1037575 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 2071073 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 2254007 53657461 ~ 53658683 (+)
G277296 NA other downstream 1351545 57264567 ~ 57264892 (+)
G277973 NA other downstream 1876712 57789734 ~ 57790332 (+)
G280315 NA other downstream 4139694 60052716 ~ 60054417 (+)
G281141 NA other downstream 4374366 60287388 ~ 60303967 (+)

Expression


Co-expression Network