Gene
RNA
| Item | Value |
|---|---|
| gene id | G275554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55914292 ~ 55914892 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312839 | True | 601 | lncRNA | 0.38 | 1 | 55914292 | 55914892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd44 | LOC106586375 | coding | upstream | 24194 | 55856319 ~ 55890098 (+) |
| LOC110520240 | LOC106586372 | coding | upstream | 64968 | 55833743 ~ 55849324 (+) |
| LOC118964369 | NA | coding | upstream | 70469 | 55843754 ~ 55843823 (+) |
| LOC118964367 | NA | coding | upstream | 71949 | 55842205 ~ 55842343 (+) |
| LOC110520236 | LOC106586369 | coding | upstream | 113662 | 55792359 ~ 55800630 (+) |
| LOC118962850 | NA | coding | downstream | 18671 | 55933563 ~ 55935062 (+) |
| si:dkey-57a22.11 | LOC106586378 | coding | downstream | 27415 | 55942307 ~ 55948120 (+) |
| LOC110520246 | LOC106586379 | coding | downstream | 33701 | 55948593 ~ 55953872 (+) |
| LOC110504321 | LOC106586380 | coding | downstream | 42439 | 55957331 ~ 55961495 (+) |
| LOC110505308 | LOC106586381 | coding | downstream | 47903 | 55962795 ~ 55964012 (+) |
| G275552 | NA | non-coding | upstream | 1270 | 55912690 ~ 55913022 (+) |
| G275551 | NA | non-coding | upstream | 1645 | 55912416 ~ 55912647 (+) |
| G275550 | NA | non-coding | upstream | 2050 | 55911813 ~ 55912242 (+) |
| G275549 | NA | non-coding | upstream | 3898 | 55910172 ~ 55910394 (+) |
| G275548 | LOC106586374 | non-coding | upstream | 4210 | 55909483 ~ 55910082 (+) |
| G275553 | LOC107595854 | non-coding | downstream | 1001 | 55915329 ~ 55916133 (+) |
| G275555 | NA | non-coding | downstream | 2423 | 55917315 ~ 55917548 (+) |
| G275556 | NA | non-coding | downstream | 3169 | 55918061 ~ 55918584 (+) |
| G275559 | NA | non-coding | downstream | 4941 | 55919833 ~ 55920370 (+) |
| G275542 | LOC106586374 | other | upstream | 13549 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 538766 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1039177 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2072675 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 2255609 | 53657461 ~ 53658683 (+) |
| G277296 | NA | other | downstream | 1349675 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1874842 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 4137824 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 4372496 | 60287388 ~ 60303967 (+) |
