G275598


Basic Information

Item Value
gene id G275598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 56008439 ~ 56011288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312909
ctatgttacatgtctagtttgtccagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgttggtgggtgattgttcctgtctatgtgttttcaccagatagggctgtttaggttttcgttacgttcatcacgttctttattttgtagtgtttgtattgattcgtgttttacgtttgttcattaaaacatggatcgcaatctacacgctgcattttggtccgatccttgttctacctcttcatcagaggaggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312909 True 318 lncRNA 0.42 2 56008439 56011288

Neighbor

gene id symbol gene type direction distance location
LOC110520249 LOC106582319 coding upstream 27089 55980352 ~ 55981350 (+)
LOC110505314 LOC106586355 coding upstream 33647 55973695 ~ 55974792 (+)
LOC110520247 LOC106586382 coding upstream 37496 55968189 ~ 55970943 (+)
LOC110520248 LOC106586383 coding upstream 40391 55966092 ~ 55968048 (+)
LOC110505308 LOC106586381 coding upstream 44427 55962795 ~ 55964012 (+)
LOC118944547 NA coding downstream 16813 56028101 ~ 56031077 (+)
LOC110505326 LOC106586362 coding downstream 51047 56062335 ~ 56062973 (+)
LOC110505333 LOC106586363 coding downstream 65896 56077184 ~ 56079296 (+)
LOC110504333 LOC106586365 coding downstream 72553 56083841 ~ 56084662 (+)
LOC110505342 LOC106586366 coding downstream 76331 56087619 ~ 56090975 (+)
LOC110520246 LOC106586379 non-coding upstream 59319 55948593 ~ 55953872 (+)
G275559 NA non-coding upstream 88069 55919833 ~ 55920370 (+)
G275556 NA non-coding upstream 89855 55918061 ~ 55918584 (+)
G275555 NA non-coding upstream 90891 55917315 ~ 55917548 (+)
G275553 LOC107595854 non-coding upstream 92306 55915329 ~ 55916133 (+)
LOC110504343 LOC106586387 non-coding downstream 128966 56139812 ~ 56289186 (+)
G275716 NA non-coding downstream 201867 56213155 ~ 56213389 (+)
G275719 NA non-coding downstream 206030 56217318 ~ 56217543 (+)
G275720 NA non-coding downstream 206365 56217653 ~ 56218376 (+)
G275722 NA non-coding downstream 208355 56219643 ~ 56219856 (+)
G275542 LOC106586374 other upstream 107696 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 632913 55371759 ~ 55375526 (+)
G274592 NA other upstream 1133324 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 2166822 53841264 ~ 53841617 (+)
G277296 NA other downstream 1253279 57264567 ~ 57264892 (+)
G277973 NA other downstream 1778446 57789734 ~ 57790332 (+)
G280315 NA other downstream 4041428 60052716 ~ 60054417 (+)
G281141 NA other downstream 4276100 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 4728951 60740239 ~ 60757350 (+)

Expression


Co-expression Network