Gene
RNA
| Item | Value |
|---|---|
| gene id | G275716 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56213155 ~ 56213389 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313035 | True | 235 | lncRNA | 0.37 | 1 | 56213155 | 56213389 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505342 | LOC106586366 | coding | upstream | 122180 | 56087619 ~ 56090975 (+) |
| LOC110504333 | LOC106586365 | coding | upstream | 128493 | 56083841 ~ 56084662 (+) |
| LOC110505333 | LOC106586363 | coding | upstream | 133859 | 56077184 ~ 56079296 (+) |
| LOC110505326 | LOC106586362 | coding | upstream | 150182 | 56062335 ~ 56062973 (+) |
| LOC118944547 | NA | coding | upstream | 182078 | 56028101 ~ 56031077 (+) |
| etv5a | LOC106586388 | coding | downstream | 90037 | 56303426 ~ 56320718 (+) |
| LOC118936648 | rbm44 | coding | downstream | 111613 | 56325002 ~ 56329352 (+) |
| LOC110520256 | rbm44 | coding | downstream | 115922 | 56329311 ~ 56336070 (+) |
| itgb5 | LOC106586391 | coding | downstream | 124639 | 56338028 ~ 56434926 (+) |
| LOC110505355 | NA | coding | downstream | 226477 | 56439866 ~ 56440949 (+) |
| LOC110504343 | LOC106586387 | non-coding | upstream | 37924 | 56139812 ~ 56289186 (+) |
| G275598 | NA | non-coding | upstream | 201867 | 56008439 ~ 56011288 (+) |
| LOC110520246 | LOC106586379 | non-coding | upstream | 264035 | 55948593 ~ 55953872 (+) |
| G275559 | NA | non-coding | upstream | 292785 | 55919833 ~ 55920370 (+) |
| G275556 | NA | non-coding | upstream | 294571 | 55918061 ~ 55918584 (+) |
| G275719 | NA | non-coding | downstream | 3929 | 56217318 ~ 56217543 (+) |
| G275720 | NA | non-coding | downstream | 4264 | 56217653 ~ 56218376 (+) |
| G275722 | NA | non-coding | downstream | 6254 | 56219643 ~ 56219856 (+) |
| G275673 | NA | non-coding | downstream | 79460 | 56292849 ~ 56295217 (+) |
| G275776 | NA | non-coding | downstream | 94918 | 56308307 ~ 56309663 (+) |
| G275553 | LOC107595854 | other | upstream | 297022 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 312412 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 837629 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1338040 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2371538 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 1051178 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1576345 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3839327 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 4073999 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4526850 | 60740239 ~ 60757350 (+) |
