G275720



Basic Information


Item Value
gene id G275720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 56217653 ~ 56218376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU313039
cctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttaagacgtgcatagatgaccagcatggtcaaataataataatcacatgcAGAACAGTTCaagctggagcagcagcacggccagttggactggggacaggaaggagtcatcatgccaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagagagagaaagaaagagagaattagagagagcatacttaaattcacacaggacaccggataagacaggagaagtcctccagatataacaaactgaccctagccccccgacacataaacgactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgatgataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagaaaaGGCAGAGTtttgcccacaaagatctccgccacggcacaacccaaggggtggcgccaacccagacaggaagatcacatcagtgactcaacccactcaagtgacgcacccctcctagtgatggcatgaaagagcaccagtaagccagactcccagctgtaatcactgcgaaaggggattctaacatgcattgactcagagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU313039 True 724 lncRNA 0.52 1 56217653 56218376

Neighbor


gene id symbol gene type direction distance location
LOC110505342 LOC106586366 coding upstream 126678 56087619 ~ 56090975 (+)
LOC110504333 LOC106586365 coding upstream 132991 56083841 ~ 56084662 (+)
LOC110505333 LOC106586363 coding upstream 138357 56077184 ~ 56079296 (+)
LOC110505326 LOC106586362 coding upstream 154680 56062335 ~ 56062973 (+)
LOC118944547 NA coding upstream 186576 56028101 ~ 56031077 (+)
etv5a LOC106586388 coding downstream 85050 56303426 ~ 56320718 (+)
LOC118936648 rbm44 coding downstream 106626 56325002 ~ 56329352 (+)
LOC110520256 rbm44 coding downstream 110935 56329311 ~ 56336070 (+)
itgb5 LOC106586391 coding downstream 119652 56338028 ~ 56434926 (+)
LOC110505355 NA coding downstream 221490 56439866 ~ 56440949 (+)
G275719 NA non-coding upstream 110 56217318 ~ 56217543 (+)
G275716 NA non-coding upstream 4264 56213155 ~ 56213389 (+)
LOC110504343 LOC106586387 non-coding upstream 42422 56139812 ~ 56289186 (+)
G275598 NA non-coding upstream 206365 56008439 ~ 56011288 (+)
LOC110520246 LOC106586379 non-coding upstream 268533 55948593 ~ 55953872 (+)
G275722 NA non-coding downstream 1267 56219643 ~ 56219856 (+)
G275673 NA non-coding downstream 74473 56292849 ~ 56295217 (+)
G275776 NA non-coding downstream 89931 56308307 ~ 56309663 (+)
G275846 NA non-coding downstream 205637 56424013 ~ 56424916 (+)
G275860 NA non-coding downstream 229220 56447596 ~ 56447865 (+)
G275553 LOC107595854 other upstream 301520 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 316910 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 842127 55371759 ~ 55375526 (+)
G274592 NA other upstream 1342538 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 2376036 53841264 ~ 53841617 (+)
G277296 NA other downstream 1046191 57264567 ~ 57264892 (+)
G277973 NA other downstream 1571358 57789734 ~ 57790332 (+)
G280315 NA other downstream 3834340 60052716 ~ 60054417 (+)
G281141 NA other downstream 4069012 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 4521863 60740239 ~ 60757350 (+)

Expression



Co-expression Network