Gene
RNA
| Item | Value |
|---|---|
| gene id | G275776 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56308307 ~ 56309663 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313100 | True | 686 | lncRNA | 0.42 | 2 | 56308307 | 56309663 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504343 | LOC106586387 | coding | upstream | 19121 | 56139812 ~ 56289186 (+) |
| LOC110505342 | LOC106586366 | coding | upstream | 217332 | 56087619 ~ 56090975 (+) |
| LOC110504333 | LOC106586365 | coding | upstream | 223645 | 56083841 ~ 56084662 (+) |
| LOC110505333 | LOC106586363 | coding | upstream | 229011 | 56077184 ~ 56079296 (+) |
| LOC110505326 | LOC106586362 | coding | upstream | 245334 | 56062335 ~ 56062973 (+) |
| LOC118936648 | rbm44 | coding | downstream | 15339 | 56325002 ~ 56329352 (+) |
| LOC110520256 | rbm44 | coding | downstream | 19648 | 56329311 ~ 56336070 (+) |
| itgb5 | LOC106586391 | coding | downstream | 28365 | 56338028 ~ 56434926 (+) |
| LOC110505355 | NA | coding | downstream | 130203 | 56439866 ~ 56440949 (+) |
| tnfaip6 | tsg6 | coding | downstream | 144341 | 56454004 ~ 56462796 (+) |
| G275673 | NA | non-coding | upstream | 13090 | 56292849 ~ 56295217 (+) |
| G275722 | NA | non-coding | upstream | 88451 | 56219643 ~ 56219856 (+) |
| G275720 | NA | non-coding | upstream | 89931 | 56217653 ~ 56218376 (+) |
| G275719 | NA | non-coding | upstream | 90764 | 56217318 ~ 56217543 (+) |
| G275716 | NA | non-coding | upstream | 94918 | 56213155 ~ 56213389 (+) |
| G275846 | NA | non-coding | downstream | 114350 | 56424013 ~ 56424916 (+) |
| G275860 | NA | non-coding | downstream | 137933 | 56447596 ~ 56447865 (+) |
| G275863 | NA | non-coding | downstream | 142214 | 56451877 ~ 56452654 (+) |
| G275870 | NA | non-coding | downstream | 166705 | 56476368 ~ 56477171 (+) |
| G275871 | NA | non-coding | downstream | 168264 | 56477927 ~ 56478418 (+) |
| G275553 | LOC107595854 | other | upstream | 392174 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 407564 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 932781 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1433192 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2466690 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 954904 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1480071 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3743053 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 3977725 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4430576 | 60740239 ~ 60757350 (+) |
