Gene
RNA
| Item | Value |
|---|---|
| gene id | G275863 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56451877 ~ 56452654 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313194 | True | 778 | lncRNA | 0.52 | 1 | 56451877 | 56452654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505355 | NA | coding | upstream | 10928 | 56439866 ~ 56440949 (+) |
| itgb5 | LOC106586391 | coding | upstream | 16951 | 56338028 ~ 56434926 (+) |
| LOC110520256 | rbm44 | coding | upstream | 115807 | 56329311 ~ 56336070 (+) |
| LOC118936648 | rbm44 | coding | upstream | 122525 | 56325002 ~ 56329352 (+) |
| etv5a | LOC106586388 | coding | upstream | 131159 | 56303426 ~ 56320718 (+) |
| tnfaip6 | tsg6 | coding | downstream | 1350 | 56454004 ~ 56462796 (+) |
| rif1 | LOC106586392 | coding | downstream | 10734 | 56463388 ~ 56494844 (+) |
| LOC110520266 | phs1 | coding | downstream | 215479 | 56668133 ~ 56680567 (+) |
| adcy5 | LOC106586396 | coding | downstream | 230410 | 56683064 ~ 56818530 (+) |
| sema5ba | LOC106586418 | coding | downstream | 464798 | 56917452 ~ 57105517 (+) |
| G275860 | NA | non-coding | upstream | 4012 | 56447596 ~ 56447865 (+) |
| G275846 | NA | non-coding | upstream | 26961 | 56424013 ~ 56424916 (+) |
| G275776 | NA | non-coding | upstream | 142214 | 56308307 ~ 56309663 (+) |
| G275673 | NA | non-coding | upstream | 156660 | 56292849 ~ 56295217 (+) |
| G275722 | NA | non-coding | upstream | 232021 | 56219643 ~ 56219856 (+) |
| G275870 | NA | non-coding | downstream | 23714 | 56476368 ~ 56477171 (+) |
| G275871 | NA | non-coding | downstream | 25273 | 56477927 ~ 56478418 (+) |
| G275875 | LOC100194727 | non-coding | downstream | 47558 | 56500212 ~ 56509613 (+) |
| G275881 | NA | non-coding | downstream | 68687 | 56521341 ~ 56523190 (+) |
| G275894 | neb | non-coding | downstream | 94143 | 56546797 ~ 56551723 (+) |
| G275553 | LOC107595854 | other | upstream | 535744 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 551134 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1076351 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1576762 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2610260 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 811913 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1337080 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3600062 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 3834734 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4287585 | 60740239 ~ 60757350 (+) |
