Gene
RNA
| Item | Value |
|---|---|
| gene id | G275871 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56477927 ~ 56478418 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313202 | True | 416 | lncRNA | 0.39 | 2 | 56477927 | 56478418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tnfaip6 | tsg6 | coding | upstream | 15131 | 56454004 ~ 56462796 (+) |
| LOC110505355 | NA | coding | upstream | 36978 | 56439866 ~ 56440949 (+) |
| itgb5 | LOC106586391 | coding | upstream | 43001 | 56338028 ~ 56434926 (+) |
| LOC110520256 | rbm44 | coding | upstream | 141857 | 56329311 ~ 56336070 (+) |
| LOC118936648 | rbm44 | coding | upstream | 148575 | 56325002 ~ 56329352 (+) |
| LOC110520266 | phs1 | coding | downstream | 189715 | 56668133 ~ 56680567 (+) |
| adcy5 | LOC106586396 | coding | downstream | 204646 | 56683064 ~ 56818530 (+) |
| sema5ba | LOC106586418 | coding | downstream | 439034 | 56917452 ~ 57105517 (+) |
| LOC110520274 | NA | coding | downstream | 743229 | 57220562 ~ 57230455 (+) |
| LOC110520279 | LOC106586423 | coding | downstream | 856619 | 57335037 ~ 57405623 (+) |
| G275870 | NA | non-coding | upstream | 756 | 56476368 ~ 56477171 (+) |
| G275863 | NA | non-coding | upstream | 25273 | 56451877 ~ 56452654 (+) |
| G275860 | NA | non-coding | upstream | 30062 | 56447596 ~ 56447865 (+) |
| G275846 | NA | non-coding | upstream | 53011 | 56424013 ~ 56424916 (+) |
| G275776 | NA | non-coding | upstream | 168264 | 56308307 ~ 56309663 (+) |
| G275875 | LOC100194727 | non-coding | downstream | 21794 | 56500212 ~ 56509613 (+) |
| G275881 | NA | non-coding | downstream | 42923 | 56521341 ~ 56523190 (+) |
| G275894 | neb | non-coding | downstream | 68379 | 56546797 ~ 56551723 (+) |
| G275903 | NA | non-coding | downstream | 72332 | 56550750 ~ 56552245 (+) |
| G275933 | LOC106586393 | non-coding | downstream | 122395 | 56600813 ~ 56603925 (+) |
| G275553 | LOC107595854 | other | upstream | 561794 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 577184 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1102401 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1602812 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2636310 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 786149 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1311316 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3574298 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 3808970 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4261821 | 60740239 ~ 60757350 (+) |
