Gene
RNA
| Item | Value |
|---|---|
| gene id | G275881 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56521341 ~ 56523190 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: nebulin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313224 | True | 316 | lncRNA | 0.54 | 2 | 56521341 | 56523190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rif1 | LOC106586392 | coding | upstream | 26497 | 56463388 ~ 56494844 (+) |
| tnfaip6 | tsg6 | coding | upstream | 58545 | 56454004 ~ 56462796 (+) |
| LOC110505355 | NA | coding | upstream | 80392 | 56439866 ~ 56440949 (+) |
| itgb5 | LOC106586391 | coding | upstream | 86415 | 56338028 ~ 56434926 (+) |
| LOC110520256 | rbm44 | coding | upstream | 185271 | 56329311 ~ 56336070 (+) |
| LOC110520266 | phs1 | coding | downstream | 144943 | 56668133 ~ 56680567 (+) |
| adcy5 | LOC106586396 | coding | downstream | 159874 | 56683064 ~ 56818530 (+) |
| sema5ba | LOC106586418 | coding | downstream | 394262 | 56917452 ~ 57105517 (+) |
| LOC110520274 | NA | coding | downstream | 698457 | 57220562 ~ 57230455 (+) |
| LOC110520279 | LOC106586423 | coding | downstream | 811847 | 57335037 ~ 57405623 (+) |
| G275875 | LOC100194727 | non-coding | upstream | 11728 | 56500212 ~ 56509613 (+) |
| G275871 | NA | non-coding | upstream | 42923 | 56477927 ~ 56478418 (+) |
| G275870 | NA | non-coding | upstream | 44170 | 56476368 ~ 56477171 (+) |
| G275863 | NA | non-coding | upstream | 68687 | 56451877 ~ 56452654 (+) |
| G275860 | NA | non-coding | upstream | 73476 | 56447596 ~ 56447865 (+) |
| G275894 | neb | non-coding | downstream | 23607 | 56546797 ~ 56551723 (+) |
| G275903 | NA | non-coding | downstream | 27560 | 56550750 ~ 56552245 (+) |
| G275933 | LOC106586393 | non-coding | downstream | 77623 | 56600813 ~ 56603925 (+) |
| G275937 | NA | non-coding | downstream | 85583 | 56608773 ~ 56612630 (+) |
| G275953 | NA | non-coding | downstream | 105124 | 56628314 ~ 56628627 (+) |
| G275553 | LOC107595854 | other | upstream | 605208 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 620598 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1145815 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1646226 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2679724 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 741377 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1266544 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3529526 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 3764198 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4217049 | 60740239 ~ 60757350 (+) |
