Gene
RNA
| Item | Value |
|---|---|
| gene id | G275937 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56608773 ~ 56612630 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: voltage-dependent L-type calcium channel subunit beta-4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313309 | True | 293 | lncRNA | 0.45 | 2 | 56608773 | 56612630 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rif1 | LOC106586392 | coding | upstream | 113929 | 56463388 ~ 56494844 (+) |
| tnfaip6 | tsg6 | coding | upstream | 145977 | 56454004 ~ 56462796 (+) |
| LOC110505355 | NA | coding | upstream | 167824 | 56439866 ~ 56440949 (+) |
| itgb5 | LOC106586391 | coding | upstream | 173847 | 56338028 ~ 56434926 (+) |
| LOC110520256 | rbm44 | coding | upstream | 272703 | 56329311 ~ 56336070 (+) |
| LOC110520266 | phs1 | coding | downstream | 55503 | 56668133 ~ 56680567 (+) |
| adcy5 | LOC106586396 | coding | downstream | 70434 | 56683064 ~ 56818530 (+) |
| sema5ba | LOC106586418 | coding | downstream | 304822 | 56917452 ~ 57105517 (+) |
| LOC110520274 | NA | coding | downstream | 609017 | 57220562 ~ 57230455 (+) |
| LOC110520279 | LOC106586423 | coding | downstream | 722407 | 57335037 ~ 57405623 (+) |
| G275933 | LOC106586393 | non-coding | upstream | 4848 | 56600813 ~ 56603925 (+) |
| G275903 | NA | non-coding | upstream | 56528 | 56550750 ~ 56552245 (+) |
| G275894 | neb | non-coding | upstream | 57050 | 56546797 ~ 56551723 (+) |
| G275881 | NA | non-coding | upstream | 85583 | 56521341 ~ 56523190 (+) |
| G275875 | LOC100194727 | non-coding | upstream | 99160 | 56500212 ~ 56509613 (+) |
| G275953 | NA | non-coding | downstream | 15684 | 56628314 ~ 56628627 (+) |
| G276151 | NA | non-coding | downstream | 333523 | 56946153 ~ 57027283 (+) |
| G276200 | NA | non-coding | downstream | 401705 | 57014335 ~ 57108879 (+) |
| G276240 | NA | non-coding | downstream | 528316 | 57140946 ~ 57145348 (+) |
| G275553 | LOC107595854 | other | upstream | 692640 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 708030 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1233247 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1733658 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2767156 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 651937 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1177104 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3440086 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 3674758 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4127609 | 60740239 ~ 60757350 (+) |
