G277293


Basic Information

Item Value
gene id G277293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57261788 ~ 57262087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314783
ggacaggaccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatattcaactaccaacttaccatcctgagacaaggccgagtatagcccacaaagatctccgccacggcacaacccaagggggggcgccaacccagacaggaagatcacatcagtgactcaacccactcaagtgacgcacccctcctagggacggcatgaaagagcaccagtaagccagtgactcagcccctgtaatagggttagaggcagagaaccCAGTGGAAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314783 True 300 lncRNA 0.54 1 57261788 57262087

Neighbor

gene id symbol gene type direction distance location
LOC110520274 NA coding upstream 31333 57220562 ~ 57230455 (+)
sema5ba LOC106586418 coding upstream 156271 56917452 ~ 57105517 (+)
adcy5 LOC106586396 coding upstream 443258 56683064 ~ 56818530 (+)
LOC110520266 phs1 coding upstream 581221 56668133 ~ 56680567 (+)
rif1 LOC106586392 coding upstream 766944 56463388 ~ 56494844 (+)
LOC110520279 LOC106586423 coding downstream 72950 57335037 ~ 57405623 (+)
LOC110520280 NA coding downstream 165338 57427425 ~ 57435274 (+)
LOC118964378 NA coding downstream 168481 57430568 ~ 57430693 (+)
LOC118936397 NA coding downstream 172058 57434145 ~ 57434270 (+)
clasp1a LOC106586426 coding downstream 184056 57446143 ~ 57554278 (+)
G277285 LOC106586419 non-coding upstream 1363 57247534 ~ 57260425 (+)
G277279 LOC106586419 non-coding upstream 16512 57240071 ~ 57245276 (+)
G277276 NA non-coding upstream 27911 57232665 ~ 57233877 (+)
G276240 NA non-coding upstream 116440 57140946 ~ 57145348 (+)
G277295 NA non-coding downstream 2019 57264106 ~ 57264419 (+)
G277302 NA non-coding downstream 15862 57277949 ~ 57297919 (+)
G277331 NA non-coding downstream 59256 57321343 ~ 57322819 (+)
G277337 NA non-coding downstream 69746 57331833 ~ 57332100 (+)
G277349 NA non-coding downstream 75467 57337554 ~ 57337847 (+)
G275553 LOC107595854 other upstream 1345655 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1361045 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 1886262 55371759 ~ 55375526 (+)
G274592 NA other upstream 2386673 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 3420171 53841264 ~ 53841617 (+)
G277296 NA other downstream 2480 57264567 ~ 57264892 (+)
G277973 NA other downstream 527647 57789734 ~ 57790332 (+)
G280315 NA other downstream 2790629 60052716 ~ 60054417 (+)
G281141 NA other downstream 3025301 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 3478152 60740239 ~ 60757350 (+)

Expression


Co-expression Network