G277331


Basic Information

Item Value
gene id G277331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57321343 ~ 57322819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314823
attattattacaatttcTCATTATTTATCCAGTCAGAGGCTGTTTCCTCACTCTCTGCCCTTCTTTCCCAGTTGCCCGAGTTTGTTATGAGAGGTCATGGTTGTTACAtcccaataatctctcctttctcctgaagtgTTTCCTGGATTCCTCACGTGTCTCATGAATTCCTTGACGAATCACCTCTTTCTTAATATTCAAATGGATAAGATCCAAGCTTAATACCCTCAAGCCTTCTTCTCCAATGCATTCTTTAGAACGAGTCGATGAATCAAATCAGCAAAGCACTTTTGGAGACTCACCCCTGTAACAATAGCAACAGAAGAGATCGTAGTGAACGGAAAAGCAGTTCTAATTACAGGCACTACGAGTTTACCTACACCTCCATTGCTCTGACGCCCATAGAATATAATAAGCTGTTGGTCTTTGAGTAAATATGTTAAATATAAATAATCATAAGTCAGATTCAAGTATTGAAGGTTTAAAGCTACAAAGCCAAGTAATCTTTCAAATACATTAAGTAGCAACACTGAGCAAAATCTAAGTTGCGTGTACCCCACACTAGGCTAAATCAATCCATTTCAAGTAGTGCAATAGTTTCCTCAAATACCCCCCACCTTGATATGTTGCTTGGCCAAATATATTAAACAAAAAAAGTAACTTGAAGATAATTCCTAATAAACTAAATGATATGACTGcttcaacctattccctatattttaAGAGTAATTATTTCACAGCAGAAAGGCTAAgtactacaactaataaaacacTGACGCTATCCTTGATAACAGCAGTACCTTGTCTGTTCGAATCAGGAGTATGGTTCCCAGTTCACTTTGGCCAACTAGTAAATACTAAACTGTACAGTGAAAATAATCCAGTTCAAATGTGTAGATAAGAGAATTGATCACAACTATTGGCCCATGTCTGTCAAAAAGGCACTAACAGACAGACAAGTCAGACTATTGATAGAATTAAGACACATTAAAACTGAAATGCTGGTGGGGTGCTGAGCGGTGTTGCTTCCGGAGGTGTAGGGGTGCAGTCTTGTTTGGCATTAAGAAGATCACATCCATATTCCATCTTCTTATTCCACTTCTGTTGTAACTGTAAAGGACGCCCATCCATCTGGAGGTCAGTGCAGCTGTCCACAGACTGACCTCTTGAACACACCCACAGCATTATAGTGGTCACTCACTGGTCAGTCATCGTCACTTTCACTGCCCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314823 True 1231 lncRNA 0.39 2 57321343 57322819

Neighbor

gene id symbol gene type direction distance location
LOC110520274 NA coding upstream 90888 57220562 ~ 57230455 (+)
sema5ba LOC106586418 coding upstream 215826 56917452 ~ 57105517 (+)
adcy5 LOC106586396 coding upstream 502813 56683064 ~ 56818530 (+)
LOC110520266 phs1 coding upstream 640776 56668133 ~ 56680567 (+)
rif1 LOC106586392 coding upstream 826499 56463388 ~ 56494844 (+)
LOC110520279 LOC106586423 coding downstream 12218 57335037 ~ 57405623 (+)
LOC110520280 NA coding downstream 104606 57427425 ~ 57435274 (+)
LOC118964378 NA coding downstream 107749 57430568 ~ 57430693 (+)
LOC118936397 NA coding downstream 111326 57434145 ~ 57434270 (+)
clasp1a LOC106586426 coding downstream 123324 57446143 ~ 57554278 (+)
G277302 NA non-coding upstream 23424 57277949 ~ 57297919 (+)
G277295 NA non-coding upstream 56924 57264106 ~ 57264419 (+)
G277293 NA non-coding upstream 59256 57261788 ~ 57262087 (+)
G277285 LOC106586419 non-coding upstream 60918 57247534 ~ 57260425 (+)
G277279 LOC106586419 non-coding upstream 76067 57240071 ~ 57245276 (+)
G277337 NA non-coding downstream 9014 57331833 ~ 57332100 (+)
G277349 NA non-coding downstream 14735 57337554 ~ 57337847 (+)
G277359 NA non-coding downstream 24512 57347331 ~ 57347540 (+)
G277360 NA non-coding downstream 24858 57347677 ~ 57347889 (+)
G277361 NA non-coding downstream 25903 57348722 ~ 57348929 (+)
G277296 NA other upstream 56451 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 1405210 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1420600 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 1945817 55371759 ~ 55375526 (+)
G274592 NA other upstream 2446228 54874399 ~ 54875115 (+)
G277973 NA other downstream 466915 57789734 ~ 57790332 (+)
G280315 NA other downstream 2729897 60052716 ~ 60054417 (+)
G281141 NA other downstream 2964569 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 3417420 60740239 ~ 60757350 (+)
G281714 NA other downstream 3568705 60891524 ~ 60893778 (+)

Expression


Co-expression Network