G277337


Basic Information

Item Value
gene id G277337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57331833 ~ 57332100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314829
attggactctggagcagtggacacacattctctggagtgatgaatcacgcttcaccatctggcagtccgacagactaaACTGGGTTTGGCGAATTcctggagaacgctacctgccccaatgcatagtgccaactgtaaagtttggtggaggaggaataatggtctgggactttttttcatggttcgggctaggccccttagttccagtgatgggaaatcttaacgctacaggatacaatgacattctagacaattttgtgtttccaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314829 True 268 lncRNA 0.47 1 57331833 57332100

Neighbor

gene id symbol gene type direction distance location
LOC110520274 NA coding upstream 101378 57220562 ~ 57230455 (+)
sema5ba LOC106586418 coding upstream 226316 56917452 ~ 57105517 (+)
adcy5 LOC106586396 coding upstream 513303 56683064 ~ 56818530 (+)
LOC110520266 phs1 coding upstream 651266 56668133 ~ 56680567 (+)
rif1 LOC106586392 coding upstream 836989 56463388 ~ 56494844 (+)
LOC110520279 LOC106586423 coding downstream 2937 57335037 ~ 57405623 (+)
LOC110520280 NA coding downstream 95325 57427425 ~ 57435274 (+)
LOC118964378 NA coding downstream 98468 57430568 ~ 57430693 (+)
LOC118936397 NA coding downstream 102045 57434145 ~ 57434270 (+)
clasp1a LOC106586426 coding downstream 114043 57446143 ~ 57554278 (+)
G277331 NA non-coding upstream 9014 57321343 ~ 57322819 (+)
G277302 NA non-coding upstream 33914 57277949 ~ 57297919 (+)
G277295 NA non-coding upstream 67414 57264106 ~ 57264419 (+)
G277293 NA non-coding upstream 69746 57261788 ~ 57262087 (+)
G277285 LOC106586419 non-coding upstream 71408 57247534 ~ 57260425 (+)
G277349 NA non-coding downstream 5454 57337554 ~ 57337847 (+)
G277359 NA non-coding downstream 15231 57347331 ~ 57347540 (+)
G277360 NA non-coding downstream 15577 57347677 ~ 57347889 (+)
G277361 NA non-coding downstream 16622 57348722 ~ 57348929 (+)
G277362 NA non-coding downstream 18061 57350161 ~ 57350776 (+)
G277296 NA other upstream 66941 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 1415700 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1431090 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 1956307 55371759 ~ 55375526 (+)
G274592 NA other upstream 2456718 54874399 ~ 54875115 (+)
G277973 NA other downstream 457634 57789734 ~ 57790332 (+)
G280315 NA other downstream 2720616 60052716 ~ 60054417 (+)
G281141 NA other downstream 2955288 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 3408139 60740239 ~ 60757350 (+)
G281714 NA other downstream 3559424 60891524 ~ 60893778 (+)

Expression


Co-expression Network