Gene
RNA
| Item | Value |
|---|---|
| gene id | G277349 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57337554 ~ 57337847 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU314841 | True | 294 | lncRNA | 0.45 | 1 | 57337554 | 57337847 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520274 | NA | coding | upstream | 107099 | 57220562 ~ 57230455 (+) |
| sema5ba | LOC106586418 | coding | upstream | 232037 | 56917452 ~ 57105517 (+) |
| adcy5 | LOC106586396 | coding | upstream | 519024 | 56683064 ~ 56818530 (+) |
| LOC110520266 | phs1 | coding | upstream | 656987 | 56668133 ~ 56680567 (+) |
| rif1 | LOC106586392 | coding | upstream | 842710 | 56463388 ~ 56494844 (+) |
| LOC110520280 | NA | coding | downstream | 89578 | 57427425 ~ 57435274 (+) |
| LOC118964378 | NA | coding | downstream | 92721 | 57430568 ~ 57430693 (+) |
| LOC118936397 | NA | coding | downstream | 96298 | 57434145 ~ 57434270 (+) |
| clasp1a | LOC106586426 | coding | downstream | 108296 | 57446143 ~ 57554278 (+) |
| LOC110520283 | LOC106586429 | coding | downstream | 233373 | 57571203 ~ 57589227 (+) |
| G277337 | NA | non-coding | upstream | 5454 | 57331833 ~ 57332100 (+) |
| G277331 | NA | non-coding | upstream | 14735 | 57321343 ~ 57322819 (+) |
| G277302 | NA | non-coding | upstream | 39635 | 57277949 ~ 57297919 (+) |
| G277295 | NA | non-coding | upstream | 73135 | 57264106 ~ 57264419 (+) |
| G277293 | NA | non-coding | upstream | 75467 | 57261788 ~ 57262087 (+) |
| G277359 | NA | non-coding | downstream | 9484 | 57347331 ~ 57347540 (+) |
| G277360 | NA | non-coding | downstream | 9830 | 57347677 ~ 57347889 (+) |
| G277361 | NA | non-coding | downstream | 10875 | 57348722 ~ 57348929 (+) |
| G277362 | NA | non-coding | downstream | 12314 | 57350161 ~ 57350776 (+) |
| LOC110520279 | LOC106586423 | non-coding | downstream | 21323 | 57335037 ~ 57405623 (+) |
| G277296 | NA | other | upstream | 72662 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 1421421 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 1436811 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1962028 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 2462439 | 54874399 ~ 54875115 (+) |
| G277973 | NA | other | downstream | 451887 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 2714869 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 2949541 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 3402392 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 3553677 | 60891524 ~ 60893778 (+) |
