Gene
RNA
| Item | Value |
|---|---|
| gene id | G277360 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57347677 ~ 57347889 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU314852 | True | 213 | lncRNA | 0.38 | 1 | 57347677 | 57347889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520274 | NA | coding | upstream | 117222 | 57220562 ~ 57230455 (+) |
| sema5ba | LOC106586418 | coding | upstream | 242160 | 56917452 ~ 57105517 (+) |
| adcy5 | LOC106586396 | coding | upstream | 529147 | 56683064 ~ 56818530 (+) |
| LOC110520266 | phs1 | coding | upstream | 667110 | 56668133 ~ 56680567 (+) |
| rif1 | LOC106586392 | coding | upstream | 852833 | 56463388 ~ 56494844 (+) |
| LOC110520280 | NA | coding | downstream | 79536 | 57427425 ~ 57435274 (+) |
| LOC118964378 | NA | coding | downstream | 82679 | 57430568 ~ 57430693 (+) |
| LOC118936397 | NA | coding | downstream | 86256 | 57434145 ~ 57434270 (+) |
| clasp1a | LOC106586426 | coding | downstream | 98254 | 57446143 ~ 57554278 (+) |
| LOC110520283 | LOC106586429 | coding | downstream | 223331 | 57571203 ~ 57589227 (+) |
| G277359 | NA | non-coding | upstream | 137 | 57347331 ~ 57347540 (+) |
| G277349 | NA | non-coding | upstream | 9830 | 57337554 ~ 57337847 (+) |
| G277337 | NA | non-coding | upstream | 15577 | 57331833 ~ 57332100 (+) |
| G277331 | NA | non-coding | upstream | 24858 | 57321343 ~ 57322819 (+) |
| G277302 | NA | non-coding | upstream | 49758 | 57277949 ~ 57297919 (+) |
| G277361 | NA | non-coding | downstream | 833 | 57348722 ~ 57348929 (+) |
| G277362 | NA | non-coding | downstream | 2272 | 57350161 ~ 57350776 (+) |
| LOC110520279 | LOC106586423 | non-coding | downstream | 11281 | 57335037 ~ 57405623 (+) |
| G277367 | NA | non-coding | downstream | 11772 | 57359661 ~ 57359895 (+) |
| G277370 | NA | non-coding | downstream | 14093 | 57361982 ~ 57362183 (+) |
| G277296 | NA | other | upstream | 82785 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 1431544 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 1446934 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1972151 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 2472562 | 54874399 ~ 54875115 (+) |
| G277973 | NA | other | downstream | 441845 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 2704827 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 2939499 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 3392350 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 3543635 | 60891524 ~ 60893778 (+) |
