G277660



Basic Information


Item Value
gene id G277660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57374848 ~ 57375092 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU315169
TAATAACATTGACCTCTGACAACAAAGTTATGGTCAAGACAAGAGTTAGAATGTAGGACGGCTATGTGGATGGTTAAAAGGTAGAGAGGTAGCTGGACTATGAGACAGGTTTAAACTGTTAGACATGCATTTGTCAATTCAGCAAAATCTCTTATCCAGATTGTCCTACGGTCAGTGAATGCAATATATTGGGCATTGGATAACAGTACAAATACAGGTATCATCTAGGCCAGGGGAGTATCAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU315169 True 245 lncRNA 0.40 1 57374848 57375092

Neighbor


gene id symbol gene type direction distance location
LOC118963713 NA coding downstream 38550 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 44452 57321238 ~ 57330396 (-)
si:dkey-91i10.3 LOC106586420 coding downstream 83321 57270782 ~ 57297762 (-)
LOC110520276 LOC106586419 coding downstream 114609 57232633 ~ 57260239 (-)
slc49a4 dirc2 coding downstream 167890 57143435 ~ 57206958 (-)
LOC110505369 LOC106586424 coding upstream 34889 57409981 ~ 57414314 (-)
LOC110520281 LOC106586425 coding upstream 40990 57416082 ~ 57427344 (-)
LOC118964377 NA coding upstream 106504 57481596 ~ 57481720 (-)
LOC110520284 LOC106586429 coding upstream 223454 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 257048 57632140 ~ 57734917 (-)
G277656 NA non-coding downstream 7893 57366746 ~ 57366955 (-)
G277653 NA non-coding downstream 15321 57359148 ~ 57359527 (-)
G277649 NA non-coding downstream 23239 57351381 ~ 57351609 (-)
G277648 NA non-coding downstream 24067 57350395 ~ 57350781 (-)
G277647 NA non-coding downstream 25033 57349572 ~ 57349815 (-)
G277661 NA non-coding upstream 3975 57379067 ~ 57379291 (-)
G277662 LOC106586423 non-coding upstream 5819 57380911 ~ 57382761 (-)
G277666 NA non-coding upstream 15843 57390935 ~ 57391169 (-)
G277671 NA non-coding upstream 21893 57396985 ~ 57397377 (-)
G277675 NA non-coding upstream 25807 57400899 ~ 57401109 (-)
G275250 NA other downstream 1963361 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2255636 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2692043 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 4123764 53249926 ~ 53251084 (-)
G277673 LOC106586423 other upstream 27892 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 209294 57584386 ~ 57589183 (-)
G284018 NA other upstream 5339483 62714575 ~ 62715177 (-)
G286522 NA other upstream 7594457 64969549 ~ 64970755 (-)
G286580 marco other upstream 7639167 65014259 ~ 65029736 (-)

Expression



Co-expression Network