G277661



Basic Information


Item Value
gene id G277661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57379067 ~ 57379291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU315170
ATTTCATATCCTCTGACCCCATGGTAAATCAGTCATACTGATCCTCTGTGAGGGGAAGAGGGCCCCAGTTAAAAAGAGAGAGGAGCTAGTCCGTAAATGATATGGGAAAGTTTTGTTTTCGCTGGAAGGTGACTTCCTTTCAGTGAtggttgaagtgtgtgtgtgtgtgtgtgtgtgttgaatcaCCTAgatgaggcagtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU315170 True 225 lncRNA 0.46 1 57379067 57379291

Neighbor


gene id symbol gene type direction distance location
LOC118963713 NA coding downstream 42769 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 48671 57321238 ~ 57330396 (-)
si:dkey-91i10.3 LOC106586420 coding downstream 87540 57270782 ~ 57297762 (-)
LOC110520276 LOC106586419 coding downstream 118828 57232633 ~ 57260239 (-)
slc49a4 dirc2 coding downstream 172109 57143435 ~ 57206958 (-)
LOC110505369 LOC106586424 coding upstream 30690 57409981 ~ 57414314 (-)
LOC110520281 LOC106586425 coding upstream 36791 57416082 ~ 57427344 (-)
LOC118964377 NA coding upstream 102305 57481596 ~ 57481720 (-)
LOC110520284 LOC106586429 coding upstream 219255 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 252849 57632140 ~ 57734917 (-)
G277660 NA non-coding downstream 3975 57374848 ~ 57375092 (-)
G277656 NA non-coding downstream 12112 57366746 ~ 57366955 (-)
G277653 NA non-coding downstream 19540 57359148 ~ 57359527 (-)
G277649 NA non-coding downstream 27458 57351381 ~ 57351609 (-)
G277648 NA non-coding downstream 28286 57350395 ~ 57350781 (-)
G277662 LOC106586423 non-coding upstream 1620 57380911 ~ 57382761 (-)
G277666 NA non-coding upstream 11644 57390935 ~ 57391169 (-)
G277671 NA non-coding upstream 17694 57396985 ~ 57397377 (-)
G277675 NA non-coding upstream 21608 57400899 ~ 57401109 (-)
G277676 NA non-coding upstream 24937 57404228 ~ 57404457 (-)
G275250 NA other downstream 1967580 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2259855 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2696262 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 4127983 53249926 ~ 53251084 (-)
G277673 LOC106586423 other upstream 23693 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 205095 57584386 ~ 57589183 (-)
G284018 NA other upstream 5335284 62714575 ~ 62715177 (-)
G286522 NA other upstream 7590258 64969549 ~ 64970755 (-)
G286580 marco other upstream 7634968 65014259 ~ 65029736 (-)

Expression



Co-expression Network