Gene
RNA
| Item | Value |
|---|---|
| gene id | G277397 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57400261 ~ 57400556 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU314889 | True | 296 | lncRNA | 0.47 | 1 | 57400261 | 57400556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520274 | NA | coding | upstream | 169806 | 57220562 ~ 57230455 (+) |
| sema5ba | LOC106586418 | coding | upstream | 294744 | 56917452 ~ 57105517 (+) |
| adcy5 | LOC106586396 | coding | upstream | 581731 | 56683064 ~ 56818530 (+) |
| LOC110520266 | phs1 | coding | upstream | 719694 | 56668133 ~ 56680567 (+) |
| rif1 | LOC106586392 | coding | upstream | 905417 | 56463388 ~ 56494844 (+) |
| LOC110520280 | NA | coding | downstream | 26869 | 57427425 ~ 57435274 (+) |
| LOC118964378 | NA | coding | downstream | 30012 | 57430568 ~ 57430693 (+) |
| LOC118936397 | NA | coding | downstream | 33589 | 57434145 ~ 57434270 (+) |
| clasp1a | LOC106586426 | coding | downstream | 45587 | 57446143 ~ 57554278 (+) |
| LOC110520283 | LOC106586429 | coding | downstream | 170664 | 57571203 ~ 57589227 (+) |
| LOC110520279 | LOC106586423 | non-coding | upstream | 680 | 57335037 ~ 57405623 (+) |
| G277394 | NA | non-coding | upstream | 4195 | 57395857 ~ 57396066 (+) |
| G277393 | NA | non-coding | upstream | 4616 | 57395417 ~ 57395645 (+) |
| G277387 | NA | non-coding | upstream | 10103 | 57389904 ~ 57390158 (+) |
| G277382 | NA | non-coding | upstream | 16066 | 57383971 ~ 57384195 (+) |
| G277346 | NA | non-coding | downstream | 9351 | 57409907 ~ 57410139 (+) |
| G277400 | NA | non-coding | downstream | 10617 | 57411173 ~ 57411475 (+) |
| G277404 | NA | non-coding | downstream | 14015 | 57414571 ~ 57415776 (+) |
| G277352 | NA | non-coding | downstream | 36530 | 57437086 ~ 57439312 (+) |
| G277353 | NA | non-coding | downstream | 41005 | 57441561 ~ 57442509 (+) |
| G277296 | NA | other | upstream | 135369 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 1484128 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 1499518 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 2024735 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 2525146 | 54874399 ~ 54875115 (+) |
| G277973 | NA | other | downstream | 389178 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 2652160 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 2886832 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 3339683 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 3490968 | 60891524 ~ 60893778 (+) |
