G277673 (LOC106586423)



Basic Information


Item Value
gene id G277673
gene name LOC106586423
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57402984 ~ 57403575 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU315188
CAAAGGCCTGATCGATGCTGTCCTGCAGATGTTCAGTGAAGCGTTCGTTGACGTCTATGAGCTCCTGAACGTTGCTGAACACCACAGTCAGCTGTTCTGAGGTCAGCAGCCCGGCGCTCTGCATGGGACCGTAGAACTCCTCCTTGATGATCCTCAGGTCCTCCCCGTAGCTTGACTCCGTGTTCAGGAACTCCAAGATGgcttccttcctctctgtcctcaGCTTGGAGCAGCGCTCACACATACCGGTACCCTCCCCGTCCGTCCGGGCCACCCCGTGCCCGTCTCTCTGGCCACAGTCTGGGCAGGGTCTTTGGGCCTCCCAGGCCCGAAGGGAGTTAGAGGGTCTCTTCCAGCCGCGAGCCAGACAGGGTCCAATCCCGCTGTCCACCCGTTCTACCTCTGCCCCTCCACTGCTGTGTATTCTCCGGGTATCTTCGTCATCGTCGCGGTCGTCACACAGACCCACCACGCCGCTGTCGGCACTGAGGCTGCTCACGGTGCTCCAGCGGTTATGCCCAGCCCTTGTCACACCCAGAACCCCAAGACGCTCCTCACCGCGGGGCTCAGAGCGCACCCGCACAGAGGCAGG

Function


NR:

description
uncharacterized protein LOC110520279

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU315188 True 592 TUCP 0.62 1 57402984 57403575

Neighbor


gene id symbol gene type direction distance location
LOC118963713 NA coding downstream 66686 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 72588 57321238 ~ 57330396 (-)
si:dkey-91i10.3 LOC106586420 coding downstream 111457 57270782 ~ 57297762 (-)
LOC110520276 LOC106586419 coding downstream 142745 57232633 ~ 57260239 (-)
slc49a4 dirc2 coding downstream 196026 57143435 ~ 57206958 (-)
LOC110505369 LOC106586424 coding upstream 6406 57409981 ~ 57414314 (-)
LOC110520281 LOC106586425 coding upstream 12507 57416082 ~ 57427344 (-)
LOC118964377 NA coding upstream 78021 57481596 ~ 57481720 (-)
LOC110520284 LOC106586429 coding upstream 194971 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 228565 57632140 ~ 57734917 (-)
G277675 NA non-coding downstream 1875 57400899 ~ 57401109 (-)
G277671 NA non-coding downstream 5607 57396985 ~ 57397377 (-)
G277666 NA non-coding downstream 11815 57390935 ~ 57391169 (-)
G277662 LOC106586423 non-coding downstream 20223 57380911 ~ 57382761 (-)
G277661 NA non-coding downstream 23693 57379067 ~ 57379291 (-)
G277676 NA non-coding upstream 653 57404228 ~ 57404457 (-)
G277642 NA non-coding upstream 33131 57436706 ~ 57436977 (-)
G277692 NA non-coding upstream 44161 57447736 ~ 57448421 (-)
G277700 NA non-coding upstream 51811 57455386 ~ 57506250 (-)
G277765 LOC106586426 non-coding upstream 116579 57520154 ~ 57522613 (-)
G275250 NA other downstream 1991497 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2283772 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2720179 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 4151900 53249926 ~ 53251084 (-)
G277749 LOC106586429 other upstream 180811 57584386 ~ 57589183 (-)
G284018 NA other upstream 5311000 62714575 ~ 62715177 (-)
G286522 NA other upstream 7565974 64969549 ~ 64970755 (-)
G286580 marco other upstream 7610684 65014259 ~ 65029736 (-)
G286638 NA other upstream 7651125 65054700 ~ 65075985 (-)

Expression



Co-expression Network