G277404


Basic Information

Item Value
gene id G277404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57414571 ~ 57415776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314899
AAAACACAAGAAACAGAACAGCCAGGGGGATTACACAAAGAAATCAGGAAGAGAACCAAAAAACTATAATACAAATCCACATTATATATAAACAAATACAGACATGtagcaacaacaaacaaaaaaaaacattttgttttgtaaACGTTTTAAAGATTCTAAATAGTTTTCCAAATCATATTTGTTTTAAATAAGAAAAGGGCCCTTTTCTTCATAAATGTTTATTTGTGTATGAAAAATGTTCccaataaaataaatagttttatGATGTACTGACGTTCAATTGTGTAACCAGAGTAGTAAAATAATATGTCAAATTTAGATATATCAGTGGTTGTATGCATTTTCTTGCCATGGTATAGTTTAACATGAGTCCAGAACACCTCACTATGTAAACAATTACATAATAAGTGTTCAATAGATTCATTTTCTAGTTCACAAAAACAGCATTCACTGGTAACATCAGGTATATACTTTGAAATCAAGCTATTACACGGATATAATCTATGGAAAATCTTAAAGGAGATGTCCTATACTTTATTGGTCACCATACATTTGTGTGGAGTGAGCCTAGCACAGCGCAAGTTTACATCAAACGATGAAGCCCAAAAACATATTGCAGAGGGAATAGATTTCCTGTAGAAAATATCCCTTCATAAACGATTGTTGAATTTCTTATATAGTAAACCTATGCCATTCACCTGGATATCTTTTACAATAATGTTCCAAAATATGCATTATTCTGAAGTAAAGATTTTATCCCACTAGGTATAGCTTTTATAACAGTGTCATATTCCTTGCTTGAAACCTCAAAGTTGTATCTTTCCATAAATTATCTCTGCGTAAATAGATTCCCACTAATACTAACTAATGTGCTGACAAGGACAATGATTTTCGAGAACCAGTTACGGTAAAATCTGGTTTCTATGTAATATCGACCCATTATTCCATATAAACATTTATGAGGTGAAAAGTtgttgccattcatttttgtGTTGAGCAAATTCgacactcattgacctccatacaaaactCCTTGCTTGGTCTTGCATGGGGACTTCGTAAATGTGTGCATTTAGATGATGTCATAATTTCCCTACATCATCGATTGTTCGTTCACCCGTTCCTAGTATTGCCGCGTTCGGAGCTTGTCGGAACTAGGAAAGTTGAAGATTTCCgcgtttcctagttccgactagcataTGA

Function

NR:

description
uncharacterized protein LOC109964271

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314899 True 1206 lncRNA 0.33 1 57414571 57415776

Neighbor

gene id symbol gene type direction distance location
LOC110520279 LOC106586423 coding upstream 8948 57335037 ~ 57405623 (+)
LOC110520274 NA coding upstream 184116 57220562 ~ 57230455 (+)
sema5ba LOC106586418 coding upstream 309054 56917452 ~ 57105517 (+)
adcy5 LOC106586396 coding upstream 596041 56683064 ~ 56818530 (+)
LOC110520266 phs1 coding upstream 734004 56668133 ~ 56680567 (+)
LOC110520280 NA coding downstream 11649 57427425 ~ 57435274 (+)
LOC118964378 NA coding downstream 14792 57430568 ~ 57430693 (+)
LOC118936397 NA coding downstream 18369 57434145 ~ 57434270 (+)
clasp1a LOC106586426 coding downstream 30367 57446143 ~ 57554278 (+)
LOC110520283 LOC106586429 coding downstream 155444 57571203 ~ 57589227 (+)
G277400 NA non-coding upstream 3096 57411173 ~ 57411475 (+)
G277346 NA non-coding upstream 4432 57409907 ~ 57410139 (+)
G277397 NA non-coding upstream 14015 57400261 ~ 57400556 (+)
G277394 NA non-coding upstream 18505 57395857 ~ 57396066 (+)
G277393 NA non-coding upstream 18926 57395417 ~ 57395645 (+)
G277352 NA non-coding downstream 21310 57437086 ~ 57439312 (+)
G277353 NA non-coding downstream 25785 57441561 ~ 57442509 (+)
G277441 NA non-coding downstream 64352 57480128 ~ 57505477 (+)
G277445 NA non-coding downstream 72438 57488214 ~ 57489144 (+)
G277296 NA other upstream 149679 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 1498438 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1513828 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 2039045 55371759 ~ 55375526 (+)
G274592 NA other upstream 2539456 54874399 ~ 54875115 (+)
G277973 NA other downstream 373958 57789734 ~ 57790332 (+)
G280315 NA other downstream 2636940 60052716 ~ 60054417 (+)
G281141 NA other downstream 2871612 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 3324463 60740239 ~ 60757350 (+)
G281714 NA other downstream 3475748 60891524 ~ 60893778 (+)

Expression


Co-expression Network