G277765 (LOC106586426)


Basic Information

Item Value
gene id G277765
gene name LOC106586426
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57520154 ~ 57522613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU315292
tatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtagataataAAAGAGTAGACACAAGGAACTAAATATAGAAAACCAAGAGGTAGACGATCAGCTTGAGAAGTAGGCAAGACTAAACCCCAACGACCTCTGACCCCTAACTCagaccactcacacacagacagaccacagGGTGGGCGAGTTTCCCTGCATGCAACATTCACCTTTACACAAATATCACAGGGTCCTTTCCCTTCACTAATCACTAATAAACAGTACAAAATGTAAAGGACAACGACTTAGGAGGATAACAAAATTAGTTGTGTATAACGTGCGAGGGAGGAGAAGTGTCGTGGTGTGCTGTGTTGACTGCAGATAGCTATCTAACCATGTCTGTCGTCAGTAATCAATTATTATTACCGTATTGGTCAAACATGCAGACCTACCAGATATACCAGACGAAGAGGTCAGAATgatgtagtagtgcactatgggttaAGTTAGTGTGTAGACAACACGGaaaagaggacagacagaaggGAGGGGGCCCAGTCCCCGACAGACaaggaacacaaacacacaatcttACCAGTATCAATTTTACCGGGTGTGCCATCTTTTGAGCATAAAGCAAAGCGGAGGGGGGGGTGGAGCAAGTGGAAGAAGAGGTATAGTTAGACATCAGTACCAGttaggcaggagagagagagaggagagagagacagaggaggggtggggaaggagagagatagcggtgacagagagaggcaggagtGAAAGAGAGGTGAGTGAGCGGGAGAAAGAGGTCTCATTGGTAATGGACTGCAAGCAGAGTACACTCCACAGGGACGTGTTAGGGCAAGAACAGAGGGACAGCATCTGGATTGCAGCACGCTTCAGTATCAAACTGCGCCAattttctttttttgggggggtgggttGTTCATCATTAAGGTCAGTAGCCATAACTTAGAGTGAATATAGGCAGCCATTTGTCATGTTTAGTTTAATTAGTTTACAGACAAACTTCTGGCCTATTTGTATGTTTCTCTTCAGAGCACAGCTTAACGATGTCTTACTAACAACATCACATGAATTAACATATCCACTCTGGCCATAAAAACCAGTGGTTTTCAGATTAATATTTCTTCTAAATAACGTAATTAAGACATCGTGGAGACTTTGAGAAATGACTGTTCCAGAACTGACATCCTGTGACCATGACATTTTGAaatatagtctggtgtggtgtgtgtggggtagTTAGAGCCTGGTAGTTAgacctggggagggaggggagggggtagtgTGTGTTTTACCTAGTGAGGCGTAGGAGCCTGGGGGCAGGGTAGCTGCTGAGCTGAAGGGAGAAGCGGAGGGCACGGTGATCAGGCGTGACTTGGCGCTGGCCGCGGCGTTCACGTCGACATCACTACGGGAACGCTGAAGGGAACCGCCGGAGTTGGAGTTCACCCTGGAACTCAACATCTTACCTGCCTCTTGTCATGCTGCCTCCTATGGCACTCTTGACAGACAGGGGCCGACGAGGCTCtcctgtgaggaggaggatgagcgGTCTGATTGGGGGAGAGACACGACACTGTCAGAACTCTTCAGGTGAGACTGCAGAGCCTTCTGATAGGTTGACTCCAGGGCCTGGAACAGATGCTCCGCCTCCCGGCTGTAGTGGCCATGGAAACCCCAATAACACCTAtgggtgagggaggggggagaaaggtcagaggtcacatgAAGGTCACAGACGTCACAGCCCCTTGTTTAAGTAGATGAACATAACTGTCAGCACATGACTCATATGACAGCACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU315292 True 1844 lncRNA 0.48 3 57520154 57522613

Neighbor

gene id symbol gene type direction distance location
LOC118964377 NA coding downstream 38434 57481596 ~ 57481720 (-)
LOC110520281 LOC106586425 coding downstream 92810 57416082 ~ 57427344 (-)
LOC110505369 LOC106586424 coding downstream 105840 57409981 ~ 57414314 (-)
LOC118963713 NA coding downstream 183856 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 189758 57321238 ~ 57330396 (-)
LOC110520284 LOC106586429 coding upstream 75933 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 109527 57632140 ~ 57734917 (-)
LOC110520286 LOC106586431 coding upstream 386994 57909607 ~ 57919306 (-)
si:dkey-3d4.3 LOC106586432 coding upstream 411457 57934070 ~ 57943312 (-)
LOC118964362 NA coding upstream 979944 58502557 ~ 58502699 (-)
G277700 NA non-coding downstream 13904 57455386 ~ 57506250 (-)
G277692 NA non-coding downstream 71733 57447736 ~ 57448421 (-)
G277642 NA non-coding downstream 83177 57436706 ~ 57436977 (-)
G277676 NA non-coding downstream 115697 57404228 ~ 57404457 (-)
G277675 NA non-coding downstream 119045 57400899 ~ 57401109 (-)
G277773 LOC106586426 non-coding upstream 11206 57533819 ~ 57534557 (-)
G277774 NA non-coding upstream 14193 57536806 ~ 57542559 (-)
G277776 NA non-coding upstream 19438 57542051 ~ 57544297 (-)
G277784 NA non-coding upstream 28084 57550697 ~ 57551335 (-)
G277783 NA non-coding upstream 28787 57551400 ~ 57554253 (-)
G277673 LOC106586423 other downstream 116579 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 222392 57270782 ~ 57297762 (-)
G275250 NA other downstream 2108667 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2400942 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2837349 54679918 ~ 54682805 (-)
G277749 LOC106586429 other upstream 61773 57584386 ~ 57589183 (-)
G284018 NA other upstream 5191962 62714575 ~ 62715177 (-)
G286522 NA other upstream 7446936 64969549 ~ 64970755 (-)
G286580 marco other upstream 7491646 65014259 ~ 65029736 (-)
G286638 NA other upstream 7532087 65054700 ~ 65075985 (-)

Expression


Co-expression Network