Gene
RNA
| Item | Value |
|---|---|
| gene id | G277773 |
| gene name | LOC106586426 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57533819 ~ 57534557 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: CLIP-associating protein 2-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU315301 | True | 428 | lncRNA | 0.51 | 2 | 57533819 | 57534557 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964377 | NA | coding | downstream | 52099 | 57481596 ~ 57481720 (-) |
| LOC110520281 | LOC106586425 | coding | downstream | 106475 | 57416082 ~ 57427344 (-) |
| LOC110505369 | LOC106586424 | coding | downstream | 119505 | 57409981 ~ 57414314 (-) |
| LOC118963713 | NA | coding | downstream | 197521 | 57332568 ~ 57336298 (-) |
| LOC110520278 | LOC106586422 | coding | downstream | 203423 | 57321238 ~ 57330396 (-) |
| LOC110520284 | LOC106586429 | coding | upstream | 63989 | 57595333 ~ 57609026 (-) |
| LOC110520285 | LOC106586430 | coding | upstream | 97583 | 57632140 ~ 57734917 (-) |
| LOC110520286 | LOC106586431 | coding | upstream | 375050 | 57909607 ~ 57919306 (-) |
| si:dkey-3d4.3 | LOC106586432 | coding | upstream | 399513 | 57934070 ~ 57943312 (-) |
| LOC118964362 | NA | coding | upstream | 968000 | 58502557 ~ 58502699 (-) |
| G277765 | LOC106586426 | non-coding | downstream | 11206 | 57520154 ~ 57522613 (-) |
| G277700 | NA | non-coding | downstream | 27569 | 57455386 ~ 57506250 (-) |
| G277692 | NA | non-coding | downstream | 85398 | 57447736 ~ 57448421 (-) |
| G277642 | NA | non-coding | downstream | 96842 | 57436706 ~ 57436977 (-) |
| G277676 | NA | non-coding | downstream | 129362 | 57404228 ~ 57404457 (-) |
| G277774 | NA | non-coding | upstream | 2249 | 57536806 ~ 57542559 (-) |
| G277776 | NA | non-coding | upstream | 7494 | 57542051 ~ 57544297 (-) |
| G277784 | NA | non-coding | upstream | 16140 | 57550697 ~ 57551335 (-) |
| G277783 | NA | non-coding | upstream | 16843 | 57551400 ~ 57554253 (-) |
| G277788 | NA | non-coding | upstream | 24091 | 57558648 ~ 57559078 (-) |
| G277673 | LOC106586423 | other | downstream | 130244 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 236057 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 2122332 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 2414607 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 2851014 | 54679918 ~ 54682805 (-) |
| G277749 | LOC106586429 | other | upstream | 49829 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 5180018 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 7434992 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 7479702 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 7520143 | 65054700 ~ 65075985 (-) |
