G277776


Basic Information

Item Value
gene id G277776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57542051 ~ 57544297 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU315307
GTAAAACACATCTTATATTCCTGGTTGTATTCCTTTACCACGCTGCTGGTGTTGCTGGAGTTCTTGAGGTGGTTGTGGAGCAGCTTGGTGGCCCCGTCCTGGAAGGTCTTGGGCAGGGCTCCCAGCAGCATGGTGAACTCCGGGGTGTTCAGCTCAAACAGAGAAATCAGCACCACCTGGGCCGCCTGGGggggcagaggacagagggacatACAGTAGTCAATAGTGGGGTTGTGGACTACCTggggggcagaggggataggtacatacagtcGGGGGCAGAGGGGATAAGTACATACAGTCaggggcagaggggataggtacatacagtagggggcagaggggataggtacatacagtagggagcagaggggataggtacatacagtagggggcagaggggataggtacatacagtagggagcagaggggacaggtacatacagtagggggcagaggggataggtacatacagtagggggcagaggggataggtacatacagt

Function

NR:

description
PREDICTED: CLIP-associating protein 1-like isoform X17

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU315307 True 505 lncRNA 0.55 3 57542051 57544297

Neighbor

gene id symbol gene type direction distance location
LOC118964377 NA coding downstream 60331 57481596 ~ 57481720 (-)
LOC110520281 LOC106586425 coding downstream 114707 57416082 ~ 57427344 (-)
LOC110505369 LOC106586424 coding downstream 127737 57409981 ~ 57414314 (-)
LOC118963713 NA coding downstream 205753 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 211655 57321238 ~ 57330396 (-)
LOC110520284 LOC106586429 coding upstream 54249 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 87843 57632140 ~ 57734917 (-)
LOC110520286 LOC106586431 coding upstream 365310 57909607 ~ 57919306 (-)
si:dkey-3d4.3 LOC106586432 coding upstream 389773 57934070 ~ 57943312 (-)
LOC118964362 NA coding upstream 958260 58502557 ~ 58502699 (-)
G277773 LOC106586426 non-coding downstream 7494 57533819 ~ 57534557 (-)
G277765 LOC106586426 non-coding downstream 19438 57520154 ~ 57522613 (-)
G277700 NA non-coding downstream 35801 57455386 ~ 57506250 (-)
G277692 NA non-coding downstream 93630 57447736 ~ 57448421 (-)
G277642 NA non-coding downstream 105074 57436706 ~ 57436977 (-)
G277784 NA non-coding upstream 6400 57550697 ~ 57551335 (-)
G277783 NA non-coding upstream 7103 57551400 ~ 57554253 (-)
G277788 NA non-coding upstream 14351 57558648 ~ 57559078 (-)
G277792 NA non-coding upstream 21134 57565431 ~ 57565654 (-)
G277795 NA non-coding upstream 25289 57569586 ~ 57569884 (-)
G277673 LOC106586423 other downstream 138476 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 244289 57270782 ~ 57297762 (-)
G275250 NA other downstream 2130564 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2422839 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2859246 54679918 ~ 54682805 (-)
G277749 LOC106586429 other upstream 40089 57584386 ~ 57589183 (-)
G284018 NA other upstream 5170278 62714575 ~ 62715177 (-)
G286522 NA other upstream 7425252 64969549 ~ 64970755 (-)
G286580 marco other upstream 7469962 65014259 ~ 65029736 (-)
G286638 NA other upstream 7510403 65054700 ~ 65075985 (-)

Expression


Co-expression Network