Gene
RNA
| Item | Value |
|---|---|
| gene id | G277792 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57565431 ~ 57565654 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: high mobility group protein B2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU315325 | True | 224 | lncRNA | 0.44 | 1 | 57565431 | 57565654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964377 | NA | coding | downstream | 83711 | 57481596 ~ 57481720 (-) |
| LOC110520281 | LOC106586425 | coding | downstream | 138087 | 57416082 ~ 57427344 (-) |
| LOC110505369 | LOC106586424 | coding | downstream | 151117 | 57409981 ~ 57414314 (-) |
| LOC118963713 | NA | coding | downstream | 229133 | 57332568 ~ 57336298 (-) |
| LOC110520278 | LOC106586422 | coding | downstream | 235035 | 57321238 ~ 57330396 (-) |
| LOC110520284 | LOC106586429 | coding | upstream | 32892 | 57595333 ~ 57609026 (-) |
| LOC110520285 | LOC106586430 | coding | upstream | 66486 | 57632140 ~ 57734917 (-) |
| LOC110520286 | LOC106586431 | coding | upstream | 343953 | 57909607 ~ 57919306 (-) |
| si:dkey-3d4.3 | LOC106586432 | coding | upstream | 368416 | 57934070 ~ 57943312 (-) |
| LOC118964362 | NA | coding | upstream | 936903 | 58502557 ~ 58502699 (-) |
| G277788 | NA | non-coding | downstream | 6353 | 57558648 ~ 57559078 (-) |
| G277783 | NA | non-coding | downstream | 11178 | 57551400 ~ 57554253 (-) |
| G277784 | NA | non-coding | downstream | 14096 | 57550697 ~ 57551335 (-) |
| G277776 | NA | non-coding | downstream | 21134 | 57542051 ~ 57544297 (-) |
| G277774 | NA | non-coding | downstream | 22872 | 57536806 ~ 57542559 (-) |
| G277795 | NA | non-coding | upstream | 3932 | 57569586 ~ 57569884 (-) |
| G277800 | NA | non-coding | upstream | 10700 | 57576354 ~ 57576560 (-) |
| G277801 | NA | non-coding | upstream | 11174 | 57576828 ~ 57577034 (-) |
| G277803 | NA | non-coding | upstream | 12319 | 57577973 ~ 57578356 (-) |
| G277750 | NA | non-coding | upstream | 25024 | 57590678 ~ 57591238 (-) |
| G277673 | LOC106586423 | other | downstream | 161856 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 267669 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 2153944 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 2446219 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 2882626 | 54679918 ~ 54682805 (-) |
| G277749 | LOC106586429 | other | upstream | 18732 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 5148921 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 7403895 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 7448605 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 7489046 | 65054700 ~ 65075985 (-) |
