G277475


Basic Information

Item Value
gene id G277475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57566144 ~ 57566458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314977
gggaaattcttgagggaaacatgattcagtcttcaagagatttgggactgggacggaggttcaccttccagcaggacaatgaccccaagcatactgctaaagcaacacttgagtggttaaggggaaacatttaaatgtcttggaatggcctagtcaaagcccagacctcaatccatttgagaatctgtggtatgacttaaagattgctgtacaccagtgtaACCCAtctaacttgaaggagctggagcagttctgccttgaagaatgggcaacaatcccagtggctagatgtgccaagcttatagagacataccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314977 True 315 lncRNA 0.46 1 57566144 57566458

Neighbor

gene id symbol gene type direction distance location
clasp1a LOC106586426 coding upstream 14962 57446143 ~ 57554278 (+)
LOC110520280 NA coding upstream 130870 57427425 ~ 57435274 (+)
LOC118936397 NA coding upstream 131874 57434145 ~ 57434270 (+)
LOC118964378 NA coding upstream 135451 57430568 ~ 57430693 (+)
LOC110520279 LOC106586423 coding upstream 160521 57335037 ~ 57405623 (+)
LOC110520283 LOC106586429 coding downstream 4762 57571203 ~ 57589227 (+)
ralb ralb coding downstream 384641 57951099 ~ 57969839 (+)
LOC118964187 NA coding downstream 409607 57976065 ~ 57978805 (+)
LOC110504354 LOC106586434 coding downstream 473399 58039857 ~ 58470598 (+)
pofut2 LOC106586440 coding downstream 1370019 58936477 ~ 58948624 (+)
G277473 NA non-coding upstream 7022 57558857 ~ 57559122 (+)
G277441 NA non-coding upstream 60667 57480128 ~ 57505477 (+)
G277445 NA non-coding upstream 77000 57488214 ~ 57489144 (+)
G277353 NA non-coding upstream 123635 57441561 ~ 57442509 (+)
G277459 NA non-coding downstream 24233 57590691 ~ 57591256 (+)
G277457 LOC106586429 non-coding downstream 31944 57598402 ~ 57601408 (+)
G277500 NA non-coding downstream 61654 57628112 ~ 57671106 (+)
G277538 NA non-coding downstream 131054 57697512 ~ 57697852 (+)
G277296 NA other upstream 301252 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 1650011 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1665401 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 2190618 55371759 ~ 55375526 (+)
G274592 NA other upstream 2691029 54874399 ~ 54875115 (+)
G277973 NA other downstream 223276 57789734 ~ 57790332 (+)
G280315 NA other downstream 2486258 60052716 ~ 60054417 (+)
G281141 NA other downstream 2720930 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 3173781 60740239 ~ 60757350 (+)
G281714 NA other downstream 3325066 60891524 ~ 60893778 (+)

Expression


Co-expression Network