G277749 (LOC106586429)


Basic Information

Item Value
gene id G277749
gene name LOC106586429
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57584386 ~ 57589183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU315276
tttgaccggtagtgtacattttagtcatttaacagacacagttagtgcattcatcttaaaatagctaCATGGAACAGCCTCATATCAGTCATAGTTAGCTACTTTGAGGAAAAATTtactatcagcaaagtcagagttAAAAGGGTAAAAGGGGGGATAAAGTGTGAGTGTTAGTTAATGTTAACAGTAGGTTTATAATAGGATTCAATGTTGAACCAATTTTTAACACTTGGCCGGGATTGCATCCGTTACGCTGTTCTAGATGTTCAATATATGTCAAAAGCCAGTGGGCCCTTCATTGAGAAACCAATGACAAAAGACACATTTTCTCCCTCGATTTTTCCACAAAGCTGGCTTTTGAACATTGGAATGACTTCGATCTTTGAGCCTGTGTtccaggtaactgccaaaattaaTTTTCTTTGAACCCATCCTGTCACCCTGCAAAGGAGCTCCTTGACCCTCTCATGCTTCCATATTTTGCCATTTTCCCAGAGCGAAGCAAAGTTTTCTTGTGGGCTTACACACCTCTCAAGTTCTCCAAGGTGGATAAGACGGTCATAGCCCTGTTTCTTCCCCAAGAAGAAATGGACAACAGGCGACTTTCCATTCAACACCGATTTCATCTCGTTCCAGAATGATGTCCTCATCTGTGACACATAGCTTCCCAACTTCTGAGACTCCACAGTTTGTGACATAACGATCTGTTGTGGCCACAGCAGAGCTACAGCAATGAAGTGCAATGCCAAGGTCTCACCATATGGGATTTGACCTTGAAGAACTTGGCAAAGAAGATCAATGAGGATCTTATACGGGCGAAGGTGTTGAGATTCAGGTTTGACACAGCTTAGCACAACATTGGCATAGATGAAATTTACCATTTCTCTCACGCTCCTTTCAGGAGTTTTACTCAGAATGAAGTCATACTGCCGGACTATCTTTACCATCATGTCAGTTGAGGTAACATTGGAGAGACAATTTAGAATCCCAGAGTAAGTATCAGCTTTTCTCATCTCCAAAAATTGCCTTGCCTTGTGAATTTGGAGCATGATGCTCAGGTTCTTGTTTTTCATTAATTCTGTGGAATCTGTCTTGCAAAAGAGGTCACTGTATTGATAAAAGCACCGGAAGAGCTCCTGTCGAGTTCTTTCCTCTCGACTGTCTTTCAGGGTGAACCTGGGACCCAAATTGACATGAAAGCTGTCAAGAAAATCAAAATGCCTCTTCATGTTATGTCTGAGGTTGTACAAAAGATCTTCAAATTCACGGAGAATGCAGTAATACAAGGCATGTTTGTGATGTTTGGAATCATTCCTCGCAACATCTTGGATTGTAAATCTGCCAGACAGAACTTCACTCAGAATATCATGATGGCAATTGCCTGAAGAAAACACTGGACATTTTTCCAGTATTTCGATGATGATGACTGCAACCTGAATTTCTCCAAGGCACCCTGCAGTGTTGAAAGGgctgttgtctctcttgttttgtACTCTCAGAGTAGCCTCCTTCTTTGCAATTTCCTGTGTATCCCTGAAGGCCTCTGTTGCTGACTGGGCCATTCTAAGATAGCCTTTGAGCCTTTCAGGTCTTATGGGATCTTCTTTGTCACTTTGTATTTCACTCTTTAGCTCATGCTTGATCACTTGTGCAGATGTGTCAGAAATGTAGGAGTTATCTCTGGAAAGATCTTTCGCATTCTTTGCCCAGTCCTTTGCCTCCCTGAAATCCCTTTTCTTCAGGTATTGGTATCTGGCAAGAAGCTGAGAGATGACAGCATCTTTTTCAAAGCGCTTGGCTGCATTGAATAGAACATTTTCTTCAACACCTGGTGTCTCCTTTGCAATATCCTGGATGAGAGGTGAAAATTGAGAATCTTCACCCTTGACTGAGTGATGTCTTTTCACTAACATGGTGTGAACATCCTTCATGAGTTTATCTTTGCCCTGTATGCACTCATAAAGCTTGTCTGTGGTGAGCAGTAGATCAGTGATCTCAGCTTTGGTTACACTGTATGTGGTTGTAAGCTCCTTCAAACAGTGCACGGCCATGCTTGAGTGGATCATTCTCACTGCCTCGAATACAACCTTAGCCTCCTCTGTGCAGCAGGTCACTAGAGTGGAAAACTTCCCAAATCCAGCCTTAACATCAGAGGACCCACTATAAGGCTTGGTCTGGAGGCCAAGAAACTcttcacagagagagactgagagtgtTGCACCCTTGCAGTAGACATTCAACAAGACCAGAACAGCAATGAGTTGTGCATGTTTGTGATTTATGTTGAAGCTCTTTAGGGTGTTGCGAGCCACACCCTGTATATACTCGGGTGAAAAGTTCTTCTTCATGATCATGAAAGCGTAGAATGTGTCTGCATTCTTGTAGGTCTTCTCAATCTCCTCCAGTTTTTTCTCGAACTGCCTCTGCTCCATTTCAGAGAGGTTATTGCCAATGAACACAGTGTCTTCAGTTGATTCAGTCTTCTCCCAAGACTCAGCCCTCATGCAATTGAGTAGAATGACCTGCGGGGACCTAGATCCAATGTCCTTCTTGACACATTCCTTCTCAATGAGCTGCTGCAAATCATATGCGTCATCCATCTCCTCAAAGTCATCTAGCATGAGCAACACAGGAATCCGGGACGATTGTTCTGTTGTCTCATACATCAGTAGCTTGACCACCTGCTCGGCAACAACAACATGATCCGCGGTTCTGTCCCTCAGAACAGCACAACGGAACTTGTCTTTCAGTGCCCATAATATATGCATGGCTAGTGTAGTTCCACCACATCCTGGGACATGcaaaagtttgaaggacacacaAGCTTTTCTCAAAGAGCTCAAAGCTGGTAGGACAGTGTTCATGATGAAGTCAAACTTGTCCCGTTTGATGAATGGCATGGATCCTGGCTGCTCAGAGAAATAGAAGTTCCACCATAACACCTTTCCTCCTTTGTAGAACTTCTCCTGTATGATGGCCTTGTCTTCATTTCCTCCCTCACACTGATTCACACACAGAACATTCAGGATGTCTAGGCTGCCCTCTTCTTTCTTTTTTAACATCACTTTGCTGCCTCCTCCACAGGGTAGGAAACGGCTGGATTTCCGGTTGTCTGACCACAGACTGAGGACGGTGCCGTTAACTTCAGCAAAACTGAGCTGATATATTGATCTTGCTTTAATGTCTAATCCATAGCGGGATTCAATCAGGTCCCTCCAGCAGGTGAATGCTTCTTCATTTTCACAGATGCAAAGTATTTGCTCTGTTCCTCTGAGCTCCTGCCAGAATGTGCTGAAGGTCTCAAGCAGAGGGTCCATTTTCTCACTCACAGTAGATAGCAATATAAAAATAACCAGGAATCTCTTGTGTGGTAGCACATCTTTCCGACACAGAAATGAAATCACATTTCGTACAGACGCTCCTTTCTCTATTAACCAGTCATCTACATCTGAGGGTCTCTCTCTTTCGATACCCCCATTGCAGAGGATCCAGCTGGTGTTTCGAGTCAGTTTTAGCTTGCTAGCAATGTCCTCGACAGCCTCTGTGATTTTATATTGTACTGGCAAGTGGATATTTATTGTACTCTGGTCTTCAAAGTGCTTCATCAATCCATGTTTTGCCGACTCAGGGTCAAAGTCCAAAACAGCAGTTGGGTTTAGTTCAGGAATAAATCCCAGGGATTCCAATTGAACTAAATGTGATTTGTTTGTCACTATCAAATACCGCTCAAAGTGGGACTTGTCTAAGGATTGGGATCCACCTGTTATCATTTCACTTAGTCTGGAGCCCTGGACACTACTTTTAACCACACTAAGGCGATTTTCCTCCGCCTGTTTTCTTAGCAGTGACAGCTGTGGCACATCGTCGAGAAACCTATTGTATTCTTCCTTTGGCTTGGCAAAAGTGGTTAGTGCAAGGAGATCCCTGCTGCTGCTGTGATCACGAATGAAGAAGAGttttttctcctctttctctgtttctttgCTTTTGGACTTCCTCTTTGATTTCCTTGTATCCAAGTGGAAAACGTGATAGAAGTTCTCTTGACAGATCACAAAGTCTGGCACAATGTCCACTTCTATCACATACTTCTCTGAGGATGTCATATCAGGATTGAGAACCTCAACAAATCGAGGTGGTTTGATGCACATCTTGGCTGTCTGGATATGTCTATACTCAAAATGACCCTCAATGGCTTGTGGCAGAGCATTGACATATGCCTCTTTGTCCGGGACGCTAACTCCCAAAACTTGCCCATGAACAAAGTCTGGCTTGTCACCAACTCCAAAATGTATGGTGCCATTAGTGCGGCTATTCATGCAGGCTGCTGCAAATCGAATAACCTCATCAGTGAACTTTTCCATTTTGCTCTCCACAGCTGCCTCTGACATATGGATGTATCCTTTATATTCATGACAGGGTTCGATATAGTCTGATGCACCGGATTCTGTTACATCAAGAACGCTGTTCGCCTTGTATCTGCAGGCATCATGGTGTCGATGAAAAGGGTACGGCTTGCACGGTCTCCCAGACTGATTTGTTGTTGGGCTACTCAACTGCTCTTTCTTAAATTTCAAATGTTCATCCCTCTTGTGAATGATCAACTTTGCAGGCCCCAGTGTGACACCCACCTCTAGTAAATCAGATTTTTCTAAAAGTAAAAGACTGGGCCCATTAATGTTCTGCTGAAGCAAGATATTTGCAGATTCACCATCCACACAAGCCTCGTTGAGAGCCCATTGTTTCACATGATGTTTATTCCAATCCTTAATCTCATCTGGCAGGTCAGTTGGTTTGT

Function

NR:

description
sterile alpha motif domain-containing protein 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU315276 True 4798 TUCP 0.43 1 57584386 57589183
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118964377 NA coding downstream 102666 57481596 ~ 57481720 (-)
LOC110520281 LOC106586425 coding downstream 157042 57416082 ~ 57427344 (-)
LOC110505369 LOC106586424 coding downstream 170072 57409981 ~ 57414314 (-)
LOC118963713 NA coding downstream 248088 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 253990 57321238 ~ 57330396 (-)
LOC110520284 LOC106586429 coding upstream 9363 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 42957 57632140 ~ 57734917 (-)
LOC110520286 LOC106586431 coding upstream 320424 57909607 ~ 57919306 (-)
si:dkey-3d4.3 LOC106586432 coding upstream 344887 57934070 ~ 57943312 (-)
LOC118964362 NA coding upstream 913374 58502557 ~ 58502699 (-)
G277803 NA non-coding downstream 6030 57577973 ~ 57578356 (-)
G277801 NA non-coding downstream 7352 57576828 ~ 57577034 (-)
G277800 NA non-coding downstream 7826 57576354 ~ 57576560 (-)
G277795 NA non-coding downstream 14502 57569586 ~ 57569884 (-)
G277792 NA non-coding downstream 18732 57565431 ~ 57565654 (-)
G277750 NA non-coding upstream 1495 57590678 ~ 57591238 (-)
G277807 NA non-coding upstream 2109 57591292 ~ 57591548 (-)
G277808 NA non-coding upstream 2517 57591700 ~ 57591993 (-)
G277673 LOC106586423 other downstream 180811 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 286624 57270782 ~ 57297762 (-)
G275250 NA other downstream 2172899 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2465174 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2901581 54679918 ~ 54682805 (-)
G284018 NA other upstream 5125392 62714575 ~ 62715177 (-)
G286522 NA other upstream 7380366 64969549 ~ 64970755 (-)
G286580 marco other upstream 7425076 65014259 ~ 65029736 (-)
G286638 NA other upstream 7465517 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 7645997 65235180 ~ 65235908 (-)

Expression

G277749(LOC106586429) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 4.
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G277749(LOC106586429) Expression in each Bioproject

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G277749(LOC106586429) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network