G277538


Basic Information

Item Value
gene id G277538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57697512 ~ 57697852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU315044
CAGCCTGTGAGCTCAGCTTCCTTCTGTCTGTGGATTAAGCAACTTCCTCAGTCATAATTAAAGGTTTATCCCCTCACAATGAAGAAATTAAACTGTAAAAACTCACTGGCTAAATTATTGTTATTCATGGGAGTTTAAAGAAGCGGACGCTTGAAATGTAAACATTCCCCCCCTCTTCAGTTAAGTACACTGTGTAGTGAATACAGCCGTGGGAATTTCAGAGCGAGCAGGAACTACAACTTTGATGAATAAGAAGGATTTACTGAGCTCTTAAGTATCCAAACTCTCTCAGAGCCAAAGCTAACACTTGGACAATGTACACATCCAtaggacatgtactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU315044 True 341 lncRNA 0.40 1 57697512 57697852

Neighbor

gene id symbol gene type direction distance location
LOC110520283 LOC106586429 coding upstream 108285 57571203 ~ 57589227 (+)
clasp1a LOC106586426 coding upstream 146330 57446143 ~ 57554278 (+)
LOC110520280 NA coding upstream 262238 57427425 ~ 57435274 (+)
ralb ralb coding downstream 253247 57951099 ~ 57969839 (+)
LOC118964187 NA coding downstream 278213 57976065 ~ 57978805 (+)
LOC110504354 LOC106586434 coding downstream 342005 58039857 ~ 58470598 (+)
pofut2 LOC106586440 coding downstream 1238625 58936477 ~ 58948624 (+)
abca12 abca12 coding downstream 1263788 58961640 ~ 59064792 (+)
G277500 NA non-coding upstream 26406 57628112 ~ 57671106 (+)
G277457 LOC106586429 non-coding upstream 96104 57598402 ~ 57601408 (+)
G277459 NA non-coding upstream 106256 57590691 ~ 57591256 (+)
G277475 NA non-coding upstream 131054 57566144 ~ 57566458 (+)
G277540 NA non-coding downstream 1461 57699313 ~ 57699605 (+)
G277554 NA non-coding downstream 14877 57712729 ~ 57713020 (+)
G277571 NA non-coding downstream 36618 57734470 ~ 57734919 (+)
G277896 NA non-coding downstream 38779 57736631 ~ 57736847 (+)
G277920 NA non-coding downstream 55573 57753425 ~ 57753694 (+)
G277296 NA other upstream 432620 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 1781379 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1796769 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 2321986 55371759 ~ 55375526 (+)
G274592 NA other upstream 2822397 54874399 ~ 54875115 (+)
G277973 NA other downstream 91882 57789734 ~ 57790332 (+)
G280315 NA other downstream 2354864 60052716 ~ 60054417 (+)
G281141 NA other downstream 2589536 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 3042387 60740239 ~ 60757350 (+)
G281714 NA other downstream 3193672 60891524 ~ 60893778 (+)

Expression


Co-expression Network