Gene
RNA
| Item | Value |
|---|---|
| gene id | G277554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57712729 ~ 57713020 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU315060 | True | 292 | lncRNA | 0.36 | 1 | 57712729 | 57713020 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520283 | LOC106586429 | coding | upstream | 123502 | 57571203 ~ 57589227 (+) |
| clasp1a | LOC106586426 | coding | upstream | 161547 | 57446143 ~ 57554278 (+) |
| LOC110520280 | NA | coding | upstream | 277455 | 57427425 ~ 57435274 (+) |
| ralb | ralb | coding | downstream | 238079 | 57951099 ~ 57969839 (+) |
| LOC118964187 | NA | coding | downstream | 263045 | 57976065 ~ 57978805 (+) |
| LOC110504354 | LOC106586434 | coding | downstream | 326837 | 58039857 ~ 58470598 (+) |
| pofut2 | LOC106586440 | coding | downstream | 1223457 | 58936477 ~ 58948624 (+) |
| abca12 | abca12 | coding | downstream | 1248620 | 58961640 ~ 59064792 (+) |
| G277540 | NA | non-coding | upstream | 13124 | 57699313 ~ 57699605 (+) |
| G277538 | NA | non-coding | upstream | 14877 | 57697512 ~ 57697852 (+) |
| G277500 | NA | non-coding | upstream | 41623 | 57628112 ~ 57671106 (+) |
| G277457 | LOC106586429 | non-coding | upstream | 111321 | 57598402 ~ 57601408 (+) |
| G277459 | NA | non-coding | upstream | 121473 | 57590691 ~ 57591256 (+) |
| G277571 | NA | non-coding | downstream | 21450 | 57734470 ~ 57734919 (+) |
| G277896 | NA | non-coding | downstream | 23611 | 57736631 ~ 57736847 (+) |
| G277920 | NA | non-coding | downstream | 40405 | 57753425 ~ 57753694 (+) |
| G277922 | NA | non-coding | downstream | 41754 | 57754774 ~ 57755005 (+) |
| G277971 | NA | non-coding | downstream | 74520 | 57787540 ~ 57787819 (+) |
| G277296 | NA | other | upstream | 447837 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 1796596 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 1811986 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 2337203 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 2837614 | 54874399 ~ 54875115 (+) |
| G277973 | NA | other | downstream | 76714 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 2339696 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 2574368 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 3027219 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 3178504 | 60891524 ~ 60893778 (+) |
