G277920


Basic Information

Item Value
gene id G277920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57753425 ~ 57753694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU315453
gtgtgtattgttgtgaattgttagatactactgcactgttggagctagaaacacaagcatttcgctacacccgcaataacatctgctaaacatgtgacaaataaaatttgatttgattgtgtgcctttccaaatcatatccaatcaattaaatttaccacaggtggacttcaatcaagatgtagaaacatctcaaggataatcaattgaaacaggatgtacctgagctcaatttggagtctcatggcaaagggtctgaatacttatatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU315453 True 270 lncRNA 0.36 1 57753425 57753694

Neighbor

gene id symbol gene type direction distance location
LOC110520283 LOC106586429 coding upstream 164198 57571203 ~ 57589227 (+)
clasp1a LOC106586426 coding upstream 202243 57446143 ~ 57554278 (+)
LOC110520280 NA coding upstream 318151 57427425 ~ 57435274 (+)
ralb ralb coding downstream 197405 57951099 ~ 57969839 (+)
LOC118964187 NA coding downstream 222371 57976065 ~ 57978805 (+)
LOC110504354 LOC106586434 coding downstream 286163 58039857 ~ 58470598 (+)
pofut2 LOC106586440 coding downstream 1182783 58936477 ~ 58948624 (+)
abca12 abca12 coding downstream 1207946 58961640 ~ 59064792 (+)
G277896 NA non-coding upstream 16578 57736631 ~ 57736847 (+)
G277571 NA non-coding upstream 18506 57734470 ~ 57734919 (+)
G277554 NA non-coding upstream 40405 57712729 ~ 57713020 (+)
G277540 NA non-coding upstream 53820 57699313 ~ 57699605 (+)
G277538 NA non-coding upstream 55573 57697512 ~ 57697852 (+)
G277922 NA non-coding downstream 1080 57754774 ~ 57755005 (+)
G277971 NA non-coding downstream 33846 57787540 ~ 57787819 (+)
G278126 NA non-coding downstream 278308 58032002 ~ 58032234 (+)
G278288 NA non-coding downstream 283065 58036759 ~ 58036996 (+)
G278514 NA non-coding downstream 592416 58346110 ~ 58401360 (+)
G277296 NA other upstream 488533 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 1837292 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 1852682 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 2377899 55371759 ~ 55375526 (+)
G274592 NA other upstream 2878310 54874399 ~ 54875115 (+)
G277973 NA other downstream 36040 57789734 ~ 57790332 (+)
G280315 NA other downstream 2299022 60052716 ~ 60054417 (+)
G281141 NA other downstream 2533694 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 2986545 60740239 ~ 60757350 (+)
G281714 NA other downstream 3137830 60891524 ~ 60893778 (+)

Expression


Co-expression Network