G277966



Basic Information


Item Value
gene id G277966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57784548 ~ 57784824 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU315502
acttagattgacgcacagGTTCGTCAATAGACTCTTCAagattaatggctgtgatagtagAAAACTGAGTAtgcatcaacaacattgtagttactccacaatactaacctaattgacagagtgacaAGTAAGCCTGTAcgtaatacaaatattccaaaacatgcatcctgtttgcaataaggcattaaagtaatactgcaaataaTGTGGCAAAGCACTAATttttttcctgaatacaaagttacgtttggggaaaatccaatgcaacacattactg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU315502 True 277 lncRNA 0.35 1 57784548 57784824

Neighbor


gene id symbol gene type direction distance location
LOC110520285 LOC106586430 coding downstream 49631 57632140 ~ 57734917 (-)
LOC110520284 LOC106586429 coding downstream 175522 57595333 ~ 57609026 (-)
LOC118964377 NA coding downstream 302828 57481596 ~ 57481720 (-)
LOC110520281 LOC106586425 coding downstream 357204 57416082 ~ 57427344 (-)
LOC110505369 LOC106586424 coding downstream 370234 57409981 ~ 57414314 (-)
LOC110520286 LOC106586431 coding upstream 124783 57909607 ~ 57919306 (-)
si:dkey-3d4.3 LOC106586432 coding upstream 149246 57934070 ~ 57943312 (-)
LOC118964362 NA coding upstream 717733 58502557 ~ 58502699 (-)
LOC110520288 LOC106586437 coding upstream 959077 58743901 ~ 58761841 (-)
LOC110520289 LOC106586438 coding upstream 981603 58766427 ~ 58774628 (-)
G277808 NA non-coding downstream 192555 57591700 ~ 57591993 (-)
G277807 NA non-coding downstream 193000 57591292 ~ 57591548 (-)
G277750 NA non-coding downstream 193310 57590678 ~ 57591238 (-)
G277968 NA non-coding upstream 608 57785432 ~ 57785661 (-)
G277974 NA non-coding upstream 4991 57789815 ~ 57790145 (-)
G278220 NA non-coding upstream 150441 57935265 ~ 57988629 (-)
G278797 NA non-coding upstream 541648 58326472 ~ 58327641 (-)
G278917 NA non-coding upstream 693381 58478205 ~ 58478560 (-)
G277749 LOC106586429 other downstream 195365 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 380973 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 486786 57270782 ~ 57297762 (-)
G275250 NA other downstream 2373061 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2665336 55068639 ~ 55122013 (-)
G284018 NA other upstream 4929751 62714575 ~ 62715177 (-)
G286522 NA other upstream 7184725 64969549 ~ 64970755 (-)
G286580 marco other upstream 7229435 65014259 ~ 65029736 (-)
G286638 NA other upstream 7269876 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 7450356 65235180 ~ 65235908 (-)

Expression



Co-expression Network