Gene
RNA
| Item | Value |
|---|---|
| gene id | G278797 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 58326472 ~ 58327641 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| low-density lipoprotein receptor-related protein 1B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU316365 | True | 372 | lncRNA | 0.53 | 2 | 58326472 | 58327641 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-3d4.3 | LOC106586432 | coding | downstream | 383160 | 57934070 ~ 57943312 (-) |
| LOC110520286 | LOC106586431 | coding | downstream | 407166 | 57909607 ~ 57919306 (-) |
| LOC110520285 | LOC106586430 | coding | downstream | 591555 | 57632140 ~ 57734917 (-) |
| LOC110520284 | LOC106586429 | coding | downstream | 717446 | 57595333 ~ 57609026 (-) |
| LOC118964377 | NA | coding | downstream | 844752 | 57481596 ~ 57481720 (-) |
| LOC118964362 | NA | coding | upstream | 174916 | 58502557 ~ 58502699 (-) |
| LOC110520288 | LOC106586437 | coding | upstream | 416260 | 58743901 ~ 58761841 (-) |
| LOC110520289 | LOC106586438 | coding | upstream | 438786 | 58766427 ~ 58774628 (-) |
| LOC110520290 | myo1b | coding | upstream | 447990 | 58775631 ~ 58932254 (-) |
| vwc2l | LOC106586444 | coding | upstream | 787775 | 59115416 ~ 59144836 (-) |
| G278220 | NA | non-coding | downstream | 337843 | 57935265 ~ 57988629 (-) |
| G277974 | NA | non-coding | downstream | 536327 | 57789815 ~ 57790145 (-) |
| G277968 | NA | non-coding | downstream | 540811 | 57785432 ~ 57785661 (-) |
| G277966 | NA | non-coding | downstream | 541648 | 57784548 ~ 57784824 (-) |
| G278917 | NA | non-coding | upstream | 150564 | 58478205 ~ 58478560 (-) |
| G278941 | NA | non-coding | upstream | 167851 | 58495492 ~ 58495703 (-) |
| G278946 | NA | non-coding | upstream | 169618 | 58497259 ~ 58497557 (-) |
| G279071 | NA | non-coding | upstream | 245338 | 58572979 ~ 58573239 (-) |
| G279231 | NA | non-coding | upstream | 349106 | 58676747 ~ 58677044 (-) |
| G277749 | LOC106586429 | other | downstream | 737289 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 922897 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 1028710 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 2914985 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 3207260 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 4386934 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 6641908 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 6686618 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 6727059 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 6907539 | 65235180 ~ 65235908 (-) |
