G278917



Basic Information


Item Value
gene id G278917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58478205 ~ 58478560 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU316492
tttgcacactcttggcattctctcaaccagcttcacctggaatgctttttcagtAGTCTTGAAGGAATTTCCACATGTGCTGagcgcttgttggctgcttttccttcactctgtggtccaactcatcccaaaccatctcaattgggttgaggtcgggtgattgtggaggccaggtcttctgatgcagcactccatcacactcctccttggtcaaatagccctttccactggtctaatgtccattgctcgtgtttcttggcccaagcaagtctcttcttattattggtgtccttaaagagtggtttctttgcagcaattcgaccatgaaggcctgattcacacagtctcatctgagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU316492 True 356 lncRNA 0.47 1 58478205 58478560

Neighbor


gene id symbol gene type direction distance location
si:dkey-3d4.3 LOC106586432 coding downstream 534893 57934070 ~ 57943312 (-)
LOC110520286 LOC106586431 coding downstream 558899 57909607 ~ 57919306 (-)
LOC110520285 LOC106586430 coding downstream 743288 57632140 ~ 57734917 (-)
LOC110520284 LOC106586429 coding downstream 869179 57595333 ~ 57609026 (-)
LOC118964377 NA coding downstream 996485 57481596 ~ 57481720 (-)
LOC118964362 NA coding upstream 23997 58502557 ~ 58502699 (-)
LOC110520288 LOC106586437 coding upstream 265341 58743901 ~ 58761841 (-)
LOC110520289 LOC106586438 coding upstream 287867 58766427 ~ 58774628 (-)
LOC110520290 myo1b coding upstream 297071 58775631 ~ 58932254 (-)
vwc2l LOC106586444 coding upstream 636856 59115416 ~ 59144836 (-)
G278797 NA non-coding downstream 150564 58326472 ~ 58327641 (-)
G278220 NA non-coding downstream 489576 57935265 ~ 57988629 (-)
G277974 NA non-coding downstream 688060 57789815 ~ 57790145 (-)
G277968 NA non-coding downstream 692544 57785432 ~ 57785661 (-)
G277966 NA non-coding downstream 693381 57784548 ~ 57784824 (-)
G278941 NA non-coding upstream 16932 58495492 ~ 58495703 (-)
G278946 NA non-coding upstream 18699 58497259 ~ 58497557 (-)
G279071 NA non-coding upstream 94419 58572979 ~ 58573239 (-)
G279231 NA non-coding upstream 198187 58676747 ~ 58677044 (-)
G279243 NA non-coding upstream 209423 58687983 ~ 58688198 (-)
G277749 LOC106586429 other downstream 889022 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 1074630 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 1180443 57270782 ~ 57297762 (-)
G275250 NA other downstream 3066718 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 3358993 55068639 ~ 55122013 (-)
G284018 NA other upstream 4236015 62714575 ~ 62715177 (-)
G286522 NA other upstream 6490989 64969549 ~ 64970755 (-)
G286580 marco other upstream 6535699 65014259 ~ 65029736 (-)
G286638 NA other upstream 6576140 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 6756620 65235180 ~ 65235908 (-)

Expression



Co-expression Network