G278934


Basic Information

Item Value
gene id G278934
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58490699 ~ 58490900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU316509
cgacgtcactggtCTTGATagtcattgatccatttttcttTTTCCATtgattttgtcttgtcttcctacacacctggtttcaatcccattcattacctgttatgtatttaaccctctgtttcccctcatgtctttgtcagagattctTTGTTGTTCAGATTTCGtgtttgtattggtgcgcgacgggtccacTTACCCACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU316509 True 202 lncRNA 0.41 1 58490699 58490900

Neighbor

gene id symbol gene type direction distance location
LOC110504354 LOC106586434 coding upstream 20109 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 511894 57976065 ~ 57978805 (+)
ralb ralb coding upstream 520860 57951099 ~ 57969839 (+)
LOC110520283 LOC106586429 coding upstream 901472 57571203 ~ 57589227 (+)
clasp1a LOC106586426 coding upstream 939517 57446143 ~ 57554278 (+)
pofut2 LOC106586440 coding downstream 445577 58936477 ~ 58948624 (+)
abca12 abca12 coding downstream 470740 58961640 ~ 59064792 (+)
LOC118944557 NA coding downstream 602244 59093144 ~ 59094205 (+)
LOC110505376 NA coding downstream 1022545 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 1065778 59556678 ~ 59581956 (+)
G278909 NA non-coding upstream 18134 58472325 ~ 58472565 (+)
G278563 NA non-coding upstream 71832 58418645 ~ 58418867 (+)
G278514 NA non-coding upstream 89339 58346110 ~ 58401360 (+)
G278288 NA non-coding upstream 453703 58036759 ~ 58036996 (+)
G278947 NA non-coding downstream 9287 58500187 ~ 58500649 (+)
G278951 NA non-coding downstream 10944 58501844 ~ 58502059 (+)
G279092 NA non-coding downstream 97740 58588640 ~ 58588852 (+)
G279248 NA non-coding downstream 199536 58690436 ~ 58690737 (+)
G279252 NA non-coding downstream 201590 58692490 ~ 58692749 (+)
G277973 NA other upstream 700367 57789734 ~ 57790332 (+)
G277296 NA other upstream 1225807 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 2574566 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 2589956 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3115173 55371759 ~ 55375526 (+)
G280315 NA other downstream 1561816 60052716 ~ 60054417 (+)
G281141 NA other downstream 1796488 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 2249339 60740239 ~ 60757350 (+)
G281714 NA other downstream 2400624 60891524 ~ 60893778 (+)
G281996 NA other downstream 2542866 61033766 ~ 61037105 (+)

Expression


Co-expression Network