Item | Value |
---|---|
gene id | G278947 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 58500187 ~ 58500649 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU316522 | True | 463 | lncRNA | 0.36 | 1 | 58500187 | 58500649 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110504354 | LOC106586434 | coding | upstream | 29597 | 58039857 ~ 58470598 (+) |
LOC118964187 | NA | coding | upstream | 521382 | 57976065 ~ 57978805 (+) |
ralb | ralb | coding | upstream | 530348 | 57951099 ~ 57969839 (+) |
LOC110520283 | LOC106586429 | coding | upstream | 910960 | 57571203 ~ 57589227 (+) |
clasp1a | LOC106586426 | coding | upstream | 949005 | 57446143 ~ 57554278 (+) |
pofut2 | LOC106586440 | coding | downstream | 435828 | 58936477 ~ 58948624 (+) |
abca12 | abca12 | coding | downstream | 460991 | 58961640 ~ 59064792 (+) |
LOC118944557 | NA | coding | downstream | 592495 | 59093144 ~ 59094205 (+) |
LOC110505376 | NA | coding | downstream | 1012796 | 59513445 ~ 59515061 (+) |
ikzf2 | LOC106586445 | coding | downstream | 1056029 | 59556678 ~ 59581956 (+) |
G278934 | NA | non-coding | upstream | 9287 | 58490699 ~ 58490900 (+) |
G278909 | NA | non-coding | upstream | 27622 | 58472325 ~ 58472565 (+) |
G278563 | NA | non-coding | upstream | 81320 | 58418645 ~ 58418867 (+) |
G278514 | NA | non-coding | upstream | 98827 | 58346110 ~ 58401360 (+) |
G278951 | NA | non-coding | downstream | 1195 | 58501844 ~ 58502059 (+) |
G279092 | NA | non-coding | downstream | 87991 | 58588640 ~ 58588852 (+) |
G279248 | NA | non-coding | downstream | 189787 | 58690436 ~ 58690737 (+) |
G279252 | NA | non-coding | downstream | 191841 | 58692490 ~ 58692749 (+) |
G279267 | NA | non-coding | downstream | 201114 | 58701763 ~ 58701974 (+) |
G277973 | NA | other | upstream | 709855 | 57789734 ~ 57790332 (+) |
G277296 | NA | other | upstream | 1235295 | 57264567 ~ 57264892 (+) |
G275553 | LOC107595854 | other | upstream | 2584054 | 55915329 ~ 55916133 (+) |
G275542 | LOC106586374 | other | upstream | 2599444 | 55900194 ~ 55900743 (+) |
LOC110520231 | dbr1 | other | upstream | 3124661 | 55371759 ~ 55375526 (+) |
G280315 | NA | other | downstream | 1552067 | 60052716 ~ 60054417 (+) |
G281141 | NA | other | downstream | 1786739 | 60287388 ~ 60303967 (+) |
G281591 | LOC106586456 | other | downstream | 2239590 | 60740239 ~ 60757350 (+) |
G281714 | NA | other | downstream | 2390875 | 60891524 ~ 60893778 (+) |
G281996 | NA | other | downstream | 2533117 | 61033766 ~ 61037105 (+) |