G279248


Basic Information

Item Value
gene id G279248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58690436 ~ 58690737 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU316831
cagttagaatcaccaatttattttgagaatgtgaaatgtcagaataatagtggagagaatgacttatttcagctattatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttgatagcattgcctttatattgtttaacttgggtcaaacgtttcaggtagccttccacaagcttcccacaataagttgggtgaattttggaccattcctcctgacagagctggtgtacctgagtcaggtttgtaggccaacaattgtttacagacatattatttcactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU316831 True 302 lncRNA 0.37 1 58690436 58690737

Neighbor

gene id symbol gene type direction distance location
LOC110504354 LOC106586434 coding upstream 219846 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 711631 57976065 ~ 57978805 (+)
ralb ralb coding upstream 720597 57951099 ~ 57969839 (+)
LOC110520283 LOC106586429 coding upstream 1101209 57571203 ~ 57589227 (+)
clasp1a LOC106586426 coding upstream 1139254 57446143 ~ 57554278 (+)
pofut2 LOC106586440 coding downstream 245740 58936477 ~ 58948624 (+)
abca12 abca12 coding downstream 270903 58961640 ~ 59064792 (+)
LOC118944557 NA coding downstream 402407 59093144 ~ 59094205 (+)
LOC110505376 NA coding downstream 822708 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 865941 59556678 ~ 59581956 (+)
G279092 NA non-coding upstream 101584 58588640 ~ 58588852 (+)
G278951 NA non-coding upstream 188377 58501844 ~ 58502059 (+)
G278947 NA non-coding upstream 189787 58500187 ~ 58500649 (+)
G278934 NA non-coding upstream 199536 58490699 ~ 58490900 (+)
G278909 NA non-coding upstream 217871 58472325 ~ 58472565 (+)
G279252 NA non-coding downstream 1753 58692490 ~ 58692749 (+)
G279267 NA non-coding downstream 11026 58701763 ~ 58701974 (+)
G279300 NA non-coding downstream 46376 58737113 ~ 58737429 (+)
G279297 LOC106586437 non-coding downstream 53170 58743907 ~ 58761919 (+)
G279365 LOC106586439 non-coding downstream 88233 58778970 ~ 58801391 (+)
G277973 NA other upstream 900104 57789734 ~ 57790332 (+)
G277296 NA other upstream 1425544 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 2774303 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 2789693 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3314910 55371759 ~ 55375526 (+)
G280315 NA other downstream 1361979 60052716 ~ 60054417 (+)
G281141 NA other downstream 1596651 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 2049502 60740239 ~ 60757350 (+)
G281714 NA other downstream 2200787 60891524 ~ 60893778 (+)
G281996 NA other downstream 2343029 61033766 ~ 61037105 (+)

Expression


Co-expression Network