G279300


Basic Information

Item Value
gene id G279300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58737113 ~ 58737429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU316889
gaggaaggaaacagctcagggattagGACAATACCCTAAAACAAGAGGCCAAATACAGTATTGGTAAGcaacactggagttgtttaccaatacgacattgaatgttcctgagtggcctagttacagttttgacttaaatcggcttgaaaatctatggcaagacttgaaaatggctgtttaacaatGATAAACAACCAACTTCACAGTGCTTGAataattattttaagaatgtgcaaatattgtacaatccaggtgtgcgaagctctgagagacttacccagaaagactcacagctgtaaaggtgattctaacatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU316889 True 317 lncRNA 0.39 1 58737113 58737429

Neighbor

gene id symbol gene type direction distance location
LOC110504354 LOC106586434 coding upstream 266523 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 758308 57976065 ~ 57978805 (+)
ralb ralb coding upstream 767274 57951099 ~ 57969839 (+)
LOC110520283 LOC106586429 coding upstream 1147886 57571203 ~ 57589227 (+)
clasp1a LOC106586426 coding upstream 1185931 57446143 ~ 57554278 (+)
pofut2 LOC106586440 coding downstream 199048 58936477 ~ 58948624 (+)
abca12 abca12 coding downstream 224211 58961640 ~ 59064792 (+)
LOC118944557 NA coding downstream 355715 59093144 ~ 59094205 (+)
LOC110505376 NA coding downstream 776016 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 819249 59556678 ~ 59581956 (+)
G279267 NA non-coding upstream 35139 58701763 ~ 58701974 (+)
G279252 NA non-coding upstream 44364 58692490 ~ 58692749 (+)
G279248 NA non-coding upstream 46376 58690436 ~ 58690737 (+)
G279092 NA non-coding upstream 148261 58588640 ~ 58588852 (+)
G278951 NA non-coding upstream 235054 58501844 ~ 58502059 (+)
G279297 LOC106586437 non-coding downstream 6478 58743907 ~ 58761919 (+)
G279365 LOC106586439 non-coding downstream 41541 58778970 ~ 58801391 (+)
G279385 NA non-coding downstream 86426 58823855 ~ 58830308 (+)
G279481 NA non-coding downstream 195955 58933384 ~ 58933696 (+)
G279597 NA non-coding downstream 315343 59052772 ~ 59055118 (+)
G277973 NA other upstream 946781 57789734 ~ 57790332 (+)
G277296 NA other upstream 1472221 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 2820980 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 2836370 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3361587 55371759 ~ 55375526 (+)
G280315 NA other downstream 1315287 60052716 ~ 60054417 (+)
G281141 NA other downstream 1549959 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 2002810 60740239 ~ 60757350 (+)
G281714 NA other downstream 2154095 60891524 ~ 60893778 (+)
G281996 NA other downstream 2296337 61033766 ~ 61037105 (+)

Expression


Co-expression Network