G279385


Basic Information

Item Value
gene id G279385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58823855 ~ 58830308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU316988
ATAATACTCACAGTTGCTAATAACTCCACCCAAAGGGTCTCCCTTGAAGTCAAACTCAATGTCCATGTATTTCCCAAATCGGGATGAGTTGTCATTTCTCATTGTTTTAGCATTCCCAAAAGCCTCCAGCACAGGATTGGACTGCAGCAGCTGCTCCTTCACCTTGTTCACCTCCTGGCCCTTCCCACACACCGCCGCCACATATGACATCACC

Function

NR:

description
PREDICTED: unconventional myosin-Ib-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU316988 True 214 lncRNA 0.48 3 58823855 58830308

Neighbor

gene id symbol gene type direction distance location
LOC110504354 LOC106586434 coding upstream 353265 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 845050 57976065 ~ 57978805 (+)
ralb ralb coding upstream 854016 57951099 ~ 57969839 (+)
LOC110520283 LOC106586429 coding upstream 1234628 57571203 ~ 57589227 (+)
clasp1a LOC106586426 coding upstream 1272673 57446143 ~ 57554278 (+)
pofut2 LOC106586440 coding downstream 106169 58936477 ~ 58948624 (+)
abca12 abca12 coding downstream 131332 58961640 ~ 59064792 (+)
LOC118944557 NA coding downstream 262836 59093144 ~ 59094205 (+)
LOC110505376 NA coding downstream 683137 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 726370 59556678 ~ 59581956 (+)
G279365 LOC106586439 non-coding upstream 22464 58778970 ~ 58801391 (+)
G279297 LOC106586437 non-coding upstream 61936 58743907 ~ 58761919 (+)
G279300 NA non-coding upstream 86426 58737113 ~ 58737429 (+)
G279267 NA non-coding upstream 121881 58701763 ~ 58701974 (+)
G279252 NA non-coding upstream 131106 58692490 ~ 58692749 (+)
G279481 NA non-coding downstream 103076 58933384 ~ 58933696 (+)
G279597 NA non-coding downstream 222464 59052772 ~ 59055118 (+)
G279855 NA non-coding downstream 341361 59171669 ~ 59171914 (+)
G279890 NA non-coding downstream 368125 59198433 ~ 59198651 (+)
G279897 NA non-coding downstream 372644 59202952 ~ 59203160 (+)
G277973 NA other upstream 1033523 57789734 ~ 57790332 (+)
G277296 NA other upstream 1558963 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 2907722 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 2923112 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3448329 55371759 ~ 55375526 (+)
G280315 NA other downstream 1222408 60052716 ~ 60054417 (+)
G281141 NA other downstream 1457080 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1909931 60740239 ~ 60757350 (+)
G281714 NA other downstream 2061216 60891524 ~ 60893778 (+)
G281996 NA other downstream 2203458 61033766 ~ 61037105 (+)

Expression


Co-expression Network