Gene
RNA
| Item | Value |
|---|---|
| gene id | G279855 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 59171669 ~ 59171914 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU317483 | True | 246 | lncRNA | 0.69 | 1 | 59171669 | 59171914 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944557 | NA | coding | upstream | 77464 | 59093144 ~ 59094205 (+) |
| abca12 | abca12 | coding | upstream | 106877 | 58961640 ~ 59064792 (+) |
| pofut2 | LOC106586440 | coding | upstream | 223045 | 58936477 ~ 58948624 (+) |
| LOC110504354 | LOC106586434 | coding | upstream | 701079 | 58039857 ~ 58470598 (+) |
| LOC118964187 | NA | coding | upstream | 1192864 | 57976065 ~ 57978805 (+) |
| LOC110505376 | NA | coding | downstream | 341531 | 59513445 ~ 59515061 (+) |
| ikzf2 | LOC106586445 | coding | downstream | 384764 | 59556678 ~ 59581956 (+) |
| erbb4b | LOC106586446 | coding | downstream | 698645 | 59870559 ~ 60052294 (+) |
| LOC110505381 | NA | coding | downstream | 1095728 | 60267642 ~ 60269899 (+) |
| myl1 | LOC100135947 | coding | downstream | 1105331 | 60277245 ~ 60286080 (+) |
| G279597 | NA | non-coding | upstream | 116551 | 59052772 ~ 59055118 (+) |
| G279481 | NA | non-coding | upstream | 237973 | 58933384 ~ 58933696 (+) |
| G279385 | NA | non-coding | upstream | 341361 | 58823855 ~ 58830308 (+) |
| G279365 | LOC106586439 | non-coding | upstream | 370278 | 58778970 ~ 58801391 (+) |
| G279297 | LOC106586437 | non-coding | upstream | 409750 | 58743907 ~ 58761919 (+) |
| G279890 | NA | non-coding | downstream | 26519 | 59198433 ~ 59198651 (+) |
| G279897 | NA | non-coding | downstream | 31038 | 59202952 ~ 59203160 (+) |
| G279911 | NA | non-coding | downstream | 40565 | 59212479 ~ 59212718 (+) |
| G279977 | NA | non-coding | downstream | 105084 | 59276998 ~ 59277457 (+) |
| G279996 | NA | non-coding | downstream | 128111 | 59300025 ~ 59300428 (+) |
| G277973 | NA | other | upstream | 1381337 | 57789734 ~ 57790332 (+) |
| G277296 | NA | other | upstream | 1906777 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 3255536 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 3270926 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 3796143 | 55371759 ~ 55375526 (+) |
| G280315 | NA | other | downstream | 880802 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 1115474 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 1568325 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 1719610 | 60891524 ~ 60893778 (+) |
| G281996 | NA | other | downstream | 1861852 | 61033766 ~ 61037105 (+) |
