G279890


Basic Information

Item Value
gene id G279890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59198433 ~ 59198651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317518
caattaactcattaggaatttggggtaCCACGAGAGCggttgtttaaagagttaccatctcccgaattcaACTCTTAAGGTCTTtacctacagtggcttgcgaaagtattcacccccttggcatttttcctattttgttgccttacaacctggaattaaaatagatttttggggggtttgtatcatttgatttacacaacatgcctagcactttgaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317518 True 219 lncRNA 0.39 1 59198433 59198651

Neighbor

gene id symbol gene type direction distance location
LOC118944557 NA coding upstream 104228 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 133641 58961640 ~ 59064792 (+)
pofut2 LOC106586440 coding upstream 249809 58936477 ~ 58948624 (+)
LOC110504354 LOC106586434 coding upstream 727843 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 1219628 57976065 ~ 57978805 (+)
LOC110505376 NA coding downstream 314794 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 358027 59556678 ~ 59581956 (+)
erbb4b LOC106586446 coding downstream 671908 59870559 ~ 60052294 (+)
LOC110505381 NA coding downstream 1068991 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 1078594 60277245 ~ 60286080 (+)
G279855 NA non-coding upstream 26519 59171669 ~ 59171914 (+)
G279597 NA non-coding upstream 143315 59052772 ~ 59055118 (+)
G279481 NA non-coding upstream 264737 58933384 ~ 58933696 (+)
G279385 NA non-coding upstream 368125 58823855 ~ 58830308 (+)
G279365 LOC106586439 non-coding upstream 397042 58778970 ~ 58801391 (+)
G279897 NA non-coding downstream 4301 59202952 ~ 59203160 (+)
G279911 NA non-coding downstream 13828 59212479 ~ 59212718 (+)
G279977 NA non-coding downstream 78347 59276998 ~ 59277457 (+)
G279996 NA non-coding downstream 101374 59300025 ~ 59300428 (+)
G280021 NA non-coding downstream 140003 59338654 ~ 59339486 (+)
G277973 NA other upstream 1408101 57789734 ~ 57790332 (+)
G277296 NA other upstream 1933541 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 3282300 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 3297690 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3822907 55371759 ~ 55375526 (+)
G280315 NA other downstream 854065 60052716 ~ 60054417 (+)
G281141 NA other downstream 1088737 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1541588 60740239 ~ 60757350 (+)
G281714 NA other downstream 1692873 60891524 ~ 60893778 (+)
G281996 NA other downstream 1835115 61033766 ~ 61037105 (+)

Expression


Co-expression Network