G279977


Basic Information

Item Value
gene id G279977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59276998 ~ 59277457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317608
actttatgttggtgtttcctttattttggaagtTACAGTGcctgtGTATCTCCATAGTGACTGTAACATTTGGTCCATCCTGATGTGCACTCTATGTGAAGGGAACACACCAGCTCTGTTTGATAAAAGTGATCCCATCCCAGTCTTAGCGTGATTGTCATATTTTGGGCTTTAATGTTTGGTTTCCTTCCCGTGAGAGTGCCCTTCTAAGTAGCCACATTAGCATACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317608 True 230 lncRNA 0.42 2 59276998 59277457

Neighbor

gene id symbol gene type direction distance location
LOC118944557 NA coding upstream 182793 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 212206 58961640 ~ 59064792 (+)
pofut2 LOC106586440 coding upstream 328374 58936477 ~ 58948624 (+)
LOC110504354 LOC106586434 coding upstream 806408 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 1298193 57976065 ~ 57978805 (+)
LOC110505376 NA coding downstream 235988 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 279221 59556678 ~ 59581956 (+)
erbb4b LOC106586446 coding downstream 593102 59870559 ~ 60052294 (+)
LOC110505381 NA coding downstream 990185 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 999788 60277245 ~ 60286080 (+)
G279911 NA non-coding upstream 64280 59212479 ~ 59212718 (+)
G279897 NA non-coding upstream 73838 59202952 ~ 59203160 (+)
G279890 NA non-coding upstream 78347 59198433 ~ 59198651 (+)
G279855 NA non-coding upstream 105084 59171669 ~ 59171914 (+)
G279597 NA non-coding upstream 221880 59052772 ~ 59055118 (+)
G279996 NA non-coding downstream 22568 59300025 ~ 59300428 (+)
G280021 NA non-coding downstream 61197 59338654 ~ 59339486 (+)
G280109 NA non-coding downstream 76139 59353596 ~ 59353800 (+)
G280120 NA non-coding downstream 87527 59364984 ~ 59365196 (+)
G280127 NA non-coding downstream 94545 59372002 ~ 59372403 (+)
G277973 NA other upstream 1486666 57789734 ~ 57790332 (+)
G277296 NA other upstream 2012106 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 3360865 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 3376255 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3901472 55371759 ~ 55375526 (+)
G280315 NA other downstream 775259 60052716 ~ 60054417 (+)
G281141 NA other downstream 1009931 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1462782 60740239 ~ 60757350 (+)
G281714 NA other downstream 1614067 60891524 ~ 60893778 (+)
G281996 NA other downstream 1756309 61033766 ~ 61037105 (+)

Expression


Co-expression Network