G280109


Basic Information

Item Value
gene id G280109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59353596 ~ 59353800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317751
gggtagccggaaagtagagcattgcagtagtctaacctagaagtggcaaaagcatggattcatttttctgcataatttttggacagaaagtttctgatttttgcaatgttacgtagatggaaaaaagctgtccttgaaatggtttTGATGTGTTCTTCAAAAGGGAGAtcggggtccagagtaacgccgaggtccttcacagttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317751 True 205 lncRNA 0.41 1 59353596 59353800

Neighbor

gene id symbol gene type direction distance location
LOC118944557 NA coding upstream 259391 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 288804 58961640 ~ 59064792 (+)
pofut2 LOC106586440 coding upstream 404972 58936477 ~ 58948624 (+)
LOC110504354 LOC106586434 coding upstream 883006 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 1374791 57976065 ~ 57978805 (+)
LOC110505376 NA coding downstream 159645 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 202878 59556678 ~ 59581956 (+)
erbb4b LOC106586446 coding downstream 516759 59870559 ~ 60052294 (+)
LOC110505381 NA coding downstream 913842 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 923445 60277245 ~ 60286080 (+)
G280021 NA non-coding upstream 14110 59338654 ~ 59339486 (+)
G279996 NA non-coding upstream 53168 59300025 ~ 59300428 (+)
G279977 NA non-coding upstream 76139 59276998 ~ 59277457 (+)
G279911 NA non-coding upstream 140878 59212479 ~ 59212718 (+)
G279897 NA non-coding upstream 150436 59202952 ~ 59203160 (+)
G280120 NA non-coding downstream 11184 59364984 ~ 59365196 (+)
G280127 NA non-coding downstream 18202 59372002 ~ 59372403 (+)
G280132 NA non-coding downstream 22181 59375981 ~ 59376294 (+)
G280137 NA non-coding downstream 26951 59380751 ~ 59380955 (+)
G280142 NA non-coding downstream 33723 59387523 ~ 59387743 (+)
G277973 NA other upstream 1563264 57789734 ~ 57790332 (+)
G277296 NA other upstream 2088704 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 3437463 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 3452853 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3978070 55371759 ~ 55375526 (+)
G280315 NA other downstream 698916 60052716 ~ 60054417 (+)
G281141 NA other downstream 933588 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1386439 60740239 ~ 60757350 (+)
G281714 NA other downstream 1537724 60891524 ~ 60893778 (+)
G281996 NA other downstream 1679966 61033766 ~ 61037105 (+)

Expression


Co-expression Network